fgenesh1_pg.C_scaffold_8000400 (Trichoderma atroviride)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 fgenesh1_pg.C_scaffold_8000400 T27476_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_8000400 RanBP ZF 136 154
fgenesh1_pg.C_scaffold_8000400 RanBP ZF 238 261

Links

Other RanBP ZF family RBPs
Other Trichoderma atroviride RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB01983.1 Alternaria brassicicola AB01983.1 N 0.767
fgenesh1_pm.00795_#_61 Aspergillus carbonarius fgenesh1_pm.00795_#_61 N 0.744
ACLA_054290 Aspergillus clavatus CADACLAG00005245 N 0.744
An14g00750 Aspergillus niger CADANGAG00011011 N 0.767
ATEG_02228 Aspergillus terreus CADATEAG00000017 N 0.767
BDBG_07164 Blastomyces dermatitidis BDBG_07164 N 0.727
CIMG_08661 Coccidioides immitis CIMG_08661 N 0.791
CPSG_05597 Coccidioides posadasii CPSG_05597 N 0.791
estExt_Genewise1.C_30334 Cochliobolus heterostrophus C5 estExt_Genewise1.C_30334 N 0.767
FGSG_05263 Fusarium graminearum FGSG_05263 N 0.814
FOXG_08443 Fusarium oxysporum FOXG_08443 N 0.814
MCYG_02556 Microsporum canis MCYG_02556 N 0.791
estExt_fgenesh1_pg.C_chr_40551 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_40551 N 0.705
e_gw1.18.954.1 Nectria haematococca e_gw1.18.954.1 N 0.837
Pc13g06240 Penicillium chrysogenum Pc13g06240 N 0.767
PMAA_085380 Penicillium marneffei PMAA_085380 N 0.767
e_gw1.3.693.1 Trichoderma reesei e_gw1.3.693.1 N 0.907
fgenesh1_pg.C_scaffold_13000098 Trichoderma virens fgenesh1_pg.C_scaffold_13000098 N 0.907
UREG_02651 Uncinocarpus reesii UREG_02651 N 0.791