CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MCYG_02556
(
Microsporum canis
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
MCYG_02556
T26013_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCYG_02556T0
RanBP ZF
112
130
RTATWVCPICSFSNPVPSN
MCYG_02556T0
RanBP ZF
182
204
ICPRCTFVNHPSLQACEMCGATL
Links
Other
RanBP ZF
family RBPs
Other
Microsporum canis
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_03559
Arthroderma benhamiae
ARB_03559
N
0.833
An14g00750
Aspergillus niger
CADANGAG00011011
N
0.833
TERG_05645
Trichophyton rubrum
TERG_05645
N
0.833
TRV_06609
Trichophyton verrucosum
TRV_06609
N
0.833
TESG_07117
Trichophyton tonsurans
TESG_07117
N
0.833
ATEG_02228
Aspergillus terreus
CADATEAG00000017
N
0.810
fgenesh1_pg.C_scaffold_8000400
Trichoderma atroviride
fgenesh1_pg.C_scaffold_8000400
N
0.791
Pc13g06240
Penicillium chrysogenum
Pc13g06240
N
0.791
fgenesh1_pg.C_scaffold_13000098
Trichoderma virens
fgenesh1_pg.C_scaffold_13000098
N
0.791
e_gw1.3.693.1
Trichoderma reesei
e_gw1.3.693.1
N
0.791
CIMG_08661
Coccidioides immitis
CIMG_08661
N
0.791
fgenesh1_pm.00795_#_61
Aspergillus carbonarius
fgenesh1_pm.00795_#_61
N
0.786
UREG_02651
Uncinocarpus reesii
UREG_02651
N
0.786
PMAA_085380
Penicillium marneffei
PMAA_085380
N
0.786
CPSG_05597
Coccidioides posadasii
CPSG_05597
N
0.767
FGSG_05263
Fusarium graminearum
FGSG_05263
N
0.762
estExt_Genewise1.C_30334
Cochliobolus heterostrophus C5
estExt_Genewise1.C_30334
N
0.762
ACLA_054290
Aspergillus clavatus
CADACLAG00005245
N
0.762
AB01983.1
Alternaria brassicicola
AB01983.1
N
0.762
e_gw1.18.954.1
Nectria haematococca
e_gw1.18.954.1
N
0.762
FOXG_08443
Fusarium oxysporum
FOXG_08443
N
0.762
AFLA_114740
Aspergillus flavus
CADAFLAG00013392
N
0.738
AO090206000081
Aspergillus oryzae
CADAORAG00012242
N
0.738
estExt_fgenesh1_pg.C_chr_40551
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_40551
N
0.705