Q95M35_CALJA (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000003665 T35495_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC5
M162_0.6 		Homo sapiens AGAAADU RNAcompete
Ray et al.(2013)
RNCMPT00171 		0.993
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000006640 RRM 20 90
ENSCJAP00000006640 RRM 108 176
ENSCJAP00000006640 RRM 201 270
ENSCJAP00000006640 RRM 304 372
ENSCJAP00000045701 RRM 1 58
ENSCJAP00000045701 RRM 76 144
ENSCJAP00000045701 RRM 169 238
ENSCJAP00000045701 RRM 272 340

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NUP153 Danio rerio ENSDARG00000020323 N 0.000
NUP153 Gasterosteus aculeatus ENSGACG00000005389 N 0.000
NUP153 Oryzias latipes ENSORLG00000012674 N 0.000
NUP153 Takifugu rubripes ENSTRUG00000010163 N 0.000
NUP153 Tetraodon nigroviridis ENSTNIG00000009182 N 0.000