CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSETEG00000012394
(
Echinops telfairi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSETEG00000012394
T36963_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000010050
RRM
15
59
LFIGGLSFETTDESLWSHGEPWGLTDCVVMRDPNTKRSRGCGSVW
ENSETEP00000010050
RRM
98
165
IFVGGIKEDPEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRSFAFVTFDDRDSGVKVVLQKYHTENGHS
Links
Other
RRM
family RBPs
Other
Echinops telfairi
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCAFG00000000389
Canis familiaris
ENSCAFG00000000389
N
0.702
ENSCAFG00000024812
Canis familiaris
ENSCAFG00000024812
I
0.719
ENSCAFG00000017467
Canis familiaris
ENSCAFG00000017467
I
0.735
ENSCAFG00000017240
Canis familiaris
ENSCAFG00000017240
N
0.720
ENSCAFG00000017180
Canis familiaris
ENSCAFG00000017180
N
0.727
ENSCAFG00000016707
Canis familiaris
ENSCAFG00000016707
I
0.703
ENSCAFG00000006386
Canis familiaris
ENSCAFG00000006386
I
0.715
ENSETEG00000007429
Echinops telfairi
ENSETEG00000007429
N
0.701
ENSETEG00000019833
Echinops telfairi
ENSETEG00000019833
N
0.776
ENSMMUG00000017582
Macaca mulatta
ENSMMUG00000017582
N
0.729