CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMLUG00000002669
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000002669
T38628_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000002425
RRM
27
93
LLLSNLDFRVSDADIQQLFAEFGPLKQAAVHYDRSGRSLGTAHVHFERKADALARKQYNGVPLDVNR
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
81 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
scaffold_2600002.1
Arabidopsis lyrata
scaffold_2600002.1
N
0.000
AT3G25150
Arabidopsis thaliana
AT3G25150-TAIR-G
N
0.000
PK18139.1
Cannabis sativa
PK18139.1
N
0.000
Glyma18g33150.1
Glycine max
Glyma18g33150.1
N
0.000
Glyma08g46190.1
Glycine max
Glyma08g46190.1
N
0.000
LjT09O11.20.nd
Lotus japonicus
LjT09O11.20.nd
N
0.000
cassava38071.valid.m1
Manihot esculenta
cassava38071.valid.m1
N
0.000
cassava6830.valid.m1
Manihot esculenta
cassava6830.valid.m1
N
0.000
cassava6831.valid.m1
Manihot esculenta
cassava6831.valid.m1
N
0.000
cassava6832.valid.m1
Manihot esculenta
cassava6832.valid.m1
N
0.000
cassava6829.valid.m1
Manihot esculenta
cassava6829.valid.m1
N
0.000
B9GQM2_POPTR
Populus trichocarpa
POPTR_0002s24800
N
0.000
30217.m000250
Ricinus communis
30217.m000250
N
0.000
GSVIVG00003923001
Vitis vinifera
GSVIVG00003923001
N
0.000