CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GI24038
(
Drosophila mojavensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0146761
T43669_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0173255
RRM
242
312
LFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNVLIDDRRIH
Links
Other
RRM
family RBPs
Other
Drosophila mojavensis
RBPs
176 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Bm1_08900
Brugia malayi
Bm1_08900
I
0.000
CBN11651
Caenorhabditis brenneri
CBN11651
I
0.000
CBG02108
Caenorhabditis briggsae
CBG02108
I
0.000
CBG20166
Caenorhabditis briggsae
CBG20166
I
0.000
asd-1
Caenorhabditis elegans
R74.5
D
0.000
fox-1
Caenorhabditis elegans
T07D1.4
D
0.000
CJA17900
Caenorhabditis japonica
CJA17900
I
0.000
CJA09998
Caenorhabditis japonica
CJA09998
I
0.000
CRE06934
Caenorhabditis remanei
CRE06934
I
0.000
CRE07377
Caenorhabditis remanei
CRE07377
I
0.000
LOAG_04679
Loa loa
LOAG_04679
I
0.000
WUBG_05352
Wuchereria bancrofti
WUBG_05352
I
0.000