PHUM037550 (Pediculus humanus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PHUM037550 T45313_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPN1
M148_0.6 		Homo sapiens ARAAGA RNAcompete
Ray et al.(2013)
RNCMPT00157 		0.829
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
PHUM037550-PA RRM 97 166

Links

Other RRM family RBPs
Other Pediculus humanus RBPs

94 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pm.C_10587 Agaricus bisporus estExt_fgenesh2_pm.C_10587 I 0.000
AB04126.1 Alternaria brassicicola AB04126.1 I 0.000
fgenesh1_pg.00009_#_201 Aspergillus carbonarius fgenesh1_pg.00009_#_201 I 0.000
ACLA_092010 Aspergillus clavatus CADACLAG00008508 I 0.000
AFLA_133290 Aspergillus flavus CADAFLAG00007208 I 0.000
AFUA_2G02780 Aspergillus fumigatus CADAFUAG00003337 I 0.000
ANIA_04546 Aspergillus nidulans CADANIAG00005892 D 0.000
An07g07150 Aspergillus niger CADANGAG00005988 I 0.000
AO090026000625 Aspergillus oryzae CADAORAG00008641 I 0.000
ATEG_09612 Aspergillus terreus CADATEAG00005390 I 0.000
BDBG_04961 Blastomyces dermatitidis BDBG_04961 I 0.000
BC1G_13428 Botrytis cinerea BC1G_13428 I 0.000
CHGG_05815 Chaetomium globosum CHGG_05815 I 0.000
CIMG_01955 Coccidioides immitis CIMG_01955 I 0.000
estExt_Genewise1Plus.C_11417 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_11417 I 0.000
GLRG_03598 Colletotrichum graminicola GLRG_03598 I 0.000
CC1G_06779 Coprinopsis cinerea CC1G_06779 I 0.000
estExt_Genewise1.C_10823 Cryphonectria parasitica estExt_Genewise1.C_10823 I 0.000
FGSG_06979 Fusarium graminearum FGSG_06979 I 0.000
FOXG_01834 Fusarium oxysporum FOXG_01834 I 0.000
FVEG_08209 Fusarium verticillioides FVEG_08209 I 0.000
HCAG_06295 Histoplasma capsulatum HCAG_06295 I 0.000
e_gwh1.1.1236.1 Laccaria bicolor e_gwh1.1.1236.1 I 0.000
MGG_12912 Magnaporthe oryzae MGG_12912 I 0.000
estExt_fgenesh1_kg.C_690018 Melampsora laricis populina estExt_fgenesh1_kg.C_690018 I 0.000
MCYG_00862 Microsporum canis MCYG_00862 I 0.000
MGYG_01105 Microsporum gypseum MGYG_01105 I 0.000
estExt_fgeneshMC_pm.C_50126 Mucor circinelloides estExt_fgeneshMC_pm.C_50126 I 0.000
gw1.2.1725.1 Mucor circinelloides gw1.2.1725.1 I 0.000
estExt_Genewise1Plus.C_41937 Myceliophthora thermophila estExt_Genewise1Plus.C_41937 I 0.000
estExt_fgenesh1_pm.C_10552 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_10552 I 0.000
estExt_fgenesh1_pg.C_chr_50223 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_50223 I 0.000
e_gw1.3.1586.1 Nectria haematococca e_gw1.3.1586.1 I 0.000
NFIA_035170 Neosartorya fischeri CADNFIAG00003466 I 0.000
NCU06251 Neurospora crassa NCU06251 I 0.000
estExt_fgenesh3_kg.C_50353 Neurospora discreta estExt_fgenesh3_kg.C_50353 I 0.000
estExt_fgenesh2_kg.C_60117 Neurospora tetrasperma estExt_fgenesh2_kg.C_60117 I 0.000
PABG_02940 Paracoccidioides brasiliensis PABG_02940 I 0.000
Pc18g04820 Penicillium chrysogenum Pc18g04820 I 0.000
PMAA_044720 Penicillium marneffei PMAA_044720 I 0.000
EAT77860.2 Phaeosphaeria nodorum EAT77860.2 I 0.000
fgenesh1_pg.C_scaffold_11000272 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000272 I 0.000
estExt_Genewise1.C_440040 Phycomyces blakesleeanus estExt_Genewise1.C_440040 I 0.000
fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH Pleurotus ostreatus fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH I 0.000
Pa_7_9110 Podospora anserina Pa_7_9110 I 0.000
estExt_Genewise1Plus.C_560144 Postia placenta estExt_Genewise1Plus.C_560144 I 0.000
PGTG_14860 Puccinia graminis PGTG_14860 N 0.000
PTRG_00277 Pyrenophora tritici repentis PTRG_00277 I 0.000
estExt_fgenesh1_pm.C_11041 Schizophyllum commune estExt_fgenesh1_pm.C_11041 I 0.000
SS1G_06958 Sclerotinia sclerotiorum SS1G_06958 I 0.000
estExt_fgenesh2_kg.C_10919 Serpula lacrymans estExt_fgenesh2_kg.C_10919 I 0.000
SNOG_14668 Stagonospora nodorum SNOG_14668 I 0.000
estExt_Genewise1.C_31967 Thielavia terrestris estExt_Genewise1.C_31967 I 0.000
fgeneshTM_pg.13_#_145 Tremella mesenterica fgeneshTM_pg.13_#_145 I 0.000
e_gw1.10.1104.1 Trichoderma atroviride e_gw1.10.1104.1 I 0.000
estExt_GeneWisePlus.C_10737 Trichoderma reesei estExt_GeneWisePlus.C_10737 I 0.000
fgenesh1_pm.C_scaffold_2000184 Trichoderma virens fgenesh1_pm.C_scaffold_2000184 I 0.000
TEQG_01493 Trichophyton equinum TEQG_01493 I 0.000
TERG_00415 Trichophyton rubrum TERG_00415 I 0.000
TESG_02394 Trichophyton tonsurans TESG_02394 I 0.000
TRV_06814 Trichophyton verrucosum TRV_06814 I 0.000
GSTUMT00008354001 Tuber melanosporum GSTUMT00008354001 I 0.000
UREG_06886 Uncinocarpus reesii UREG_06886 I 0.000
UM03654 Ustilago maydis UM03654 I 0.000
VDAG_06495 Verticillium dahliae VDAG_06495 I 0.000