cassava38065.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava38065.valid.m1 T49366_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava38065.valid.m1 RRM 74 141
cassava38065.valid.m1 RRM 171 239

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.00009_#_218 Aspergillus carbonarius fgenesh1_pg.00009_#_218 N 0.000
ACLA_092660 Aspergillus clavatus CADACLAG00008386 N 0.000
AFLA_043160 Aspergillus flavus CADAFLAG00005643 N 0.000
AFUA_2G02160 Aspergillus fumigatus CADAFUAG00003346 N 0.000
An07g06750 Aspergillus niger CADANGAG00005948 N 0.000
CIMG_05516 Coccidioides immitis CIMG_05516 N 0.000
CMG145C Cyanidioschyzon merolae CMG145C N 0.000
MCYG_08333 Microsporum canis MCYG_08333 N 0.000
MGYG_05741 Microsporum gypseum MGYG_05741 N 0.000
NFIA_034530 Neosartorya fischeri CADNFIAG00002955 N 0.000
Pc20g04370 Penicillium chrysogenum Pc20g04370 N 0.000
TEQG_01674 Trichophyton equinum TEQG_01674 N 0.000
TERG_02605 Trichophyton rubrum TERG_02605 N 0.000
TESG_01971 Trichophyton tonsurans TESG_01971 N 0.000