estExt_gwp_gw1.C_3320014 (Physcomitrella patens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_gwp_gw1.C_3320014 T51616_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp_gw1.C_3320014 RRM 1 39
estExt_gwp_gw1.C_3320014 RRM 74 144
estExt_gwp_gw1.C_3320014 RRM 291 346

Links

Other RRM family RBPs
Other Physcomitrella patens RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava37705.valid.m1 Manihot esculenta cassava37705.valid.m1 N 0.711
LOC_Os10g30370 Oryza sativa LOC_Os10g30370 N 0.795
PDK_20s1383761g001 Phoenix dactylifera PDK_20s1383761g001 N 0.825
PDK_20s1450251g001 Phoenix dactylifera PDK_20s1450251g001 N 0.837
estExt_fgenesh1_pg.C_2070055 Physcomitrella patens estExt_fgenesh1_pg.C_2070055 N 0.964
B9H1K1_POPTR Populus trichocarpa POPTR_0004s18320 N 0.801
POPTR_0009s13940 Populus trichocarpa POPTR_0009s13940 N 0.795
GSVIVG00023998001 Vitis vinifera GSVIVG00023998001 N 0.732