PierreAnnot2.00074 (Micromonas pusilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PierreAnnot2.00074 T53892_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PierreAnnot2.00074 RRM 242 312

Links

Other RRM family RBPs
Other Micromonas pusilla RBPs

77 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB09303.1 Alternaria brassicicola AB09303.1 N 0.000
ARB_00840 Arthroderma benhamiae ARB_00840 N 0.000
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.000
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.000
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.000
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.000
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.000
An16g01800 Aspergillus niger CADANGAG00012651 N 0.000
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.000
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.000
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.000
CHGG_08312 Chaetomium globosum CHGG_08312 N 0.000
CIMG_06397 Coccidioides immitis CIMG_06397 N 0.000
CPSG_00675 Coccidioides posadasii CPSG_00675 N 0.000
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 0.000
GLRG_06288 Colletotrichum graminicola GLRG_06288 N 0.000
fgenesh1_pg.C_scaffold_2001068 Cryphonectria parasitica fgenesh1_pg.C_scaffold_2001068 N 0.000
FGSG_01629 Fusarium graminearum FGSG_01629 N 0.000
FOXG_11073 Fusarium oxysporum FOXG_11073 N 0.000
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.000
MGG_06218 Magnaporthe oryzae MGG_06218 N 0.000
MCYG_02010 Microsporum canis MCYG_02010 N 0.000
MGYG_04073 Microsporum gypseum MGYG_04073 N 0.000
fgenesh1_pm.7_#_729 Myceliophthora thermophila fgenesh1_pm.7_#_729 N 0.000
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.000
fgenesh1_pm.sca_8_chr1_1_0000077 Nectria haematococca fgenesh1_pm.sca_8_chr1_1_0000077 N 0.000
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.000
NCU05343 Neurospora crassa NCU05343 N 0.000
estExt_Genewise1.C_110656 Neurospora discreta estExt_Genewise1.C_110656 N 0.000
estExt_Genewise1Plus.C_570036 Neurospora tetrasperma estExt_Genewise1Plus.C_570036 N 0.000
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.000
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.000
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.000
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 0.000
Pa_6_11740 Podospora anserina Pa_6_11740 N 0.000
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.000
SS1G_02057 Sclerotinia sclerotiorum SS1G_02057 N 0.000
SNOG_09039 Stagonospora nodorum SNOG_09039 N 0.000
estExt_fgenesh2_pm.C_60019 Thielavia terrestris estExt_fgenesh2_pm.C_60019 N 0.000
fgenesh1_pm.C_scaffold_19000008 Trichoderma atroviride fgenesh1_pm.C_scaffold_19000008 N 0.000
fgenesh1_pm.C_scaffold_32000008 Trichoderma reesei fgenesh1_pm.C_scaffold_32000008 N 0.000
estExt_fgenesh1_pg.C_80160 Trichoderma virens estExt_fgenesh1_pg.C_80160 N 0.000
TEQG_06159 Trichophyton equinum TEQG_06159 N 0.000
TERG_04408 Trichophyton rubrum TERG_04408 N 0.000
TESG_06836 Trichophyton tonsurans TESG_06836 N 0.000
TRV_07498 Trichophyton verrucosum TRV_07498 N 0.000
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.000
VDBG_05689 Verticillium albo atrum VDBG_05689 N 0.000
VDAG_07628 Verticillium dahliae VDAG_07628 N 0.000