EuGene.1200010297 (Ostreococcus RCC809)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 EuGene.1200010297 T51726_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
EuGene.1200010297 RRM 245 315

Links

Other RRM family RBPs
Other Ostreococcus RCC809 RBPs

136 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gwEuk.12.143.1 Ostreococcus lucimarinus gwEuk.12.143.1 N 0.930
gw1.12.00.150.1 Ostreococcus tauri gw1.12.00.150.1 N 0.915
PierreAnnot2.00074 Micromonas pusilla PierreAnnot2.00074 N 0.845
GJ23668 Drosophila virilis FBgn0210765 N 0.817
GL13859 Drosophila persimilis FBgn0151464 N 0.817
GI24038 Drosophila mojavensis FBgn0146761 N 0.817
LOAG_08216 Loa loa LOAG_08216 N 0.817
GF18772 Drosophila ananassae FBgn0095789 N 0.817
GA26948-RA Drosophila pseudoobscura FBgn0248319 N 0.817
GH18460 Drosophila grimshawi FBgn0125927 N 0.817
GM23461 Drosophila sechellia FBgn0178328 N 0.789
GG12319 Drosophila erecta FBgn0104609 N 0.789
GE10772 Drosophila yakuba FBgn0228614 N 0.789
WUBG_04730 Wuchereria bancrofti WUBG_04730 N 0.789
GD18267 Drosophila simulans FBgn0189800 N 0.789
CG5808 Drosophila melanogaster FBgn0027617 N 0.789
ENSOANG00000001063 Ornithorhynchus anatinus ENSOANG00000001063 N 0.775
PPIL4 Takifugu rubripes ENSTRUG00000006670 N 0.775
PPIL4 Meleagris gallopavo ENSMGAG00000012596 N 0.775
e_gw.42.57.1 Nematostella vectensis e_gw.42.57.1 N 0.775
GK13166 Drosophila willistoni FBgn0215175 N 0.775
PPIL4 Tetraodon nigroviridis ENSTNIG00000002706 N 0.775
PPIL4 Gallus gallus ENSGALG00000012364 N 0.775
PPIL4 Myotis lucifugus ENSMLUG00000002766 N 0.761
PPIL4 Macaca mulatta ENSMMUG00000023067 N 0.761
PPIL4 Monodelphis domestica ENSMODG00000016825 N 0.761
CPIJ000912 Culex quinquefasciatus CPIJ000912 N 0.761
PPIL4 Otolemur garnettii ENSOGAG00000014153 N 0.761
PPIL4 Oryctolagus cuniculus ENSOCUG00000007696 N 0.761
AGAP008136 Anopheles gambiae AGAP008136 N 0.761
Ppil4 Mus musculus ENSMUSG00000015757 N 0.761
A6QP53_BOVIN Bos taurus ENSBTAG00000016980 N 0.761
AAEL005541 Aedes aegypti AAEL005541 N 0.761
PPIL4 Ochotona princeps ENSOPRG00000005619 N 0.761
PPIL4 Gorilla gorilla ENSGGOG00000009686 N 0.761
PPIL4 Homo sapiens ENSG00000131013 N 0.761
AAEL005690 Aedes aegypti AAEL005690 N 0.761
PPIL4 Loxodonta africana ENSLAFG00000026804 N 0.761
PPIL4 Microcebus murinus ENSMICG00000006287 N 0.761
Q6JDI1_CANFA Canis familiaris ENSCAFG00000000379 N 0.761
PPIL4 Taeniopygia guttata ENSTGUG00000010655 N 0.761
Ame_R008665 Ailuropoda melanoleuca Ame_R008665 N 0.761
Pa_2_13850 Podospora anserina Pa_2_13850 N 0.761
ppil4 Xenopus tropicalis ENSXETG00000021385 N 0.761
BGIBMGA008977 Bombyx mori BGIBMGA008977 N 0.761
NCU10166 Neurospora crassa NCU10166 N 0.761
estExt_Genewise1Plus.C_12820 Neurospora discreta estExt_Genewise1Plus.C_12820 N 0.761
PPIL4 Cavia porcellus ENSCPOG00000014614 N 0.761
gw1.1.256.1 Neurospora tetrasperma gw1.1.256.1 N 0.761
PPIL4 Vicugna pacos ENSVPAG00000005157 N 0.761
PPIL4 Tursiops truncatus ENSTTRG00000006014 N 0.761
PPIL4 Pteropus vampyrus ENSPVAG00000000746 N 0.761
PPIL4 Pan troglodytes ENSPTRG00000018692 N 0.761
PPIL4 Procavia capensis ENSPCAG00000008203 N 0.761
Ppil4 Rattus norvegicus ENSRNOG00000015552 N 0.761
ppil4 Danio rerio ENSDARG00000043854 N 0.761
PPIL4 Anolis carolinensis ENSACAG00000006936 N 0.761
CpipJ_CPIJ000912 Culex pipiens CpipJ_CPIJ000912 N 0.761
PPIL4 Sorex araneus ENSSARG00000011244 N 0.761
PPIL4 Equus caballus ENSECAG00000021819 N 0.761
ENSCSAVG00000010619 Ciona savignyi ENSCSAVG00000010619 N 0.746
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.746
FVEG_11166 Fusarium verticillioides FVEG_11166 N 0.746
e_gw1.6.1078.1 Selaginella moellendorfii e_gw1.6.1078.1 N 0.746
estExt_fgenesh2_pm.C_1170007 Branchiostoma floridae estExt_fgenesh2_pm.C_1170007 N 0.746
FOXG_13736 Fusarium oxysporum FOXG_13736 N 0.746
PPIL4 Oryzias latipes ENSORLG00000015310 N 0.746
amel4_ncbi_hmm35613 Apis mellifera amel4_ncbi_hmm35613 N 0.746
amel4_ncbi_hmm11961 Apis mellifera amel4_ncbi_hmm11961 N 0.746
PPIL4 Erinaceus europaeus ENSEEUG00000000959 N 0.746
PPIL4 Callithrix jacchus ENSCJAG00000019613 N 0.736
XP_001192414.1 Strongylocentrotus purpuratus XP_001192414.1 N 0.732
XP_782627.2 Strongylocentrotus purpuratus XP_782627.2 N 0.732
FGSG_04479 Fusarium graminearum FGSG_04479 N 0.732
MGG_10681 Magnaporthe oryzae MGG_10681 N 0.732
fgenesh1_pm.sca_11_chr8_3_0000173 Nectria haematococca fgenesh1_pm.sca_11_chr8_3_0000173 N 0.732
XP_001180629.1 Strongylocentrotus purpuratus XP_001180629.1 N 0.732
RO3G_06974 Rhizopus oryzae RO3G_06974 N 0.732
PPIL4 Spermophilus tridecemlineatus ENSSTOG00000013980 N 0.732
estExt_Genewise1.C_30053 Myceliophthora thermophila estExt_Genewise1.C_30053 N 0.732
PPIL4 Gasterosteus aculeatus ENSGACG00000006639 N 0.732
gw1.13.70.1 Lottia gigantea gw1.13.70.1 N 0.732
XP_787384.2 Strongylocentrotus purpuratus XP_787384.2 N 0.732
estExt_Genewise1Plus.C_40585 Mucor circinelloides estExt_Genewise1Plus.C_40585 N 0.732
e_gw1.4.2113.1 Pleurotus ostreatus e_gw1.4.2113.1 N 0.732
nasonia_NCBI_hmm783174 Nasonia vitripennis nasonia_NCBI_hmm783174 N 0.732
CHGG_06839 Chaetomium globosum CHGG_06839 N 0.732
Aqu1.223583 Amphimedon queenslandica Aqu1.223583 N 0.718
estExt_Genewise1Plus.C_61472 Cryphonectria parasitica estExt_Genewise1Plus.C_61472 N 0.718
PHUM268300 Pediculus humanus PHUM268300 N 0.718
e_gw1.4.423.1 Coccomyxa C 169 e_gw1.4.423.1 N 0.718
Sjc_0091550 Schistosoma japonicum Sjc_0091550 N 0.718
estExt_fgeneshCV_pg.C_40316 Chlorella vulgaris estExt_fgeneshCV_pg.C_40316 N 0.718
cyp6 Schizosaccharomyces pombe SPBC17G9.05 N 0.718
83285 Helobdella robusta 83285 N 0.718
e_gw1.11.236.1 Trichoderma atroviride e_gw1.11.236.1 N 0.718
fgenesh1_pm.C_scaffold_1000049 Schizophyllum commune fgenesh1_pm.C_scaffold_1000049 N 0.718
e_gw1.6.80.1 Monosiga brevicollis e_gw1.6.80.1 N 0.718
VDAG_02606 Verticillium dahliae VDAG_02606 N 0.718
estExt_Genewise1Plus.C_40228 Batrachochytrium dendrobatidis estExt_Genewise1Plus.C_40228 N 0.718
estExt_Genewise1Plus.C_chr_40303 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40303 N 0.718
SPPG_03169 Spizellomyces punctatus SPPG_03169 N 0.718
estExt_Genewise1.C_180101 Capitella teleta estExt_Genewise1.C_180101 N 0.718
fgeneshTA2_pg.C_scaffold_8000290 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_8000290 N 0.718
fgenesh1_pm.C_scaffold_3000471 Trichoderma virens fgenesh1_pm.C_scaffold_3000471 N 0.704
EAT81165.2 Phaeosphaeria nodorum EAT81165.2 N 0.704
estExt_Genewise1.C_23809 Thielavia terrestris estExt_Genewise1.C_23809 N 0.704
estExt_GeneWisePlus.C_270056 Trichoderma reesei estExt_GeneWisePlus.C_270056 N 0.704
e_gww2.22.65.1 Phanerochaete chrysosporium e_gww2.22.65.1 N 0.704
estExt_fgenesh3_pm.C_240021 Chlorella NC64A estExt_fgenesh3_pm.C_240021 N 0.704
e_gw1.20.215.1 Phycomyces blakesleeanus e_gw1.20.215.1 N 0.704
fgenesh1_pm.C_scaffold_9000117 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_9000117 N 0.704
estExt_fgenesh3_pg.C_910016 Postia placenta estExt_fgenesh3_pg.C_910016 N 0.704
Smp_165540 Schistosoma mansoni Smp_165540 N 0.704
VDBG_02138 Verticillium albo atrum VDBG_02138 N 0.704
SPOG_01415 Schizosaccharomyces cryophilus SPOG_01415 N 0.704
SNOG_11457 Stagonospora nodorum SNOG_11457 N 0.704
SJAG_00470 Schizosaccharomyces japonicus SJAG_00470 N 0.704
DGIL_AUG5s502g5t1 Acyrtosiphon pisum DGIL_AUG5s502g5t1 N 0.704
ANIA_09095 Aspergillus nidulans CADANIAG00009519 N 0.704
CRE29496 Caenorhabditis remanei CRE29496 N 0.704
CJA06296 Caenorhabditis japonica CJA06296 N 0.704
CBN08292 Caenorhabditis brenneri CBN08292 N 0.704
CBG12494 Caenorhabditis briggsae CBG12494 N 0.704
PTSG_07932 Salpingoeca rosetta PTSG_07932 N 0.704
PTRG_04608 Pyrenophora tritici repentis PTRG_04608 N 0.704
sig-7 Caenorhabditis elegans F39H2.2 N 0.704
fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.704
estExt_Genewise1Plus.C_11662 Tremella mesenterica estExt_Genewise1Plus.C_11662 N 0.704
estExt_fgenesh2_kg.C_140159 Agaricus bisporus estExt_fgenesh2_kg.C_140159 N 0.704
BC1G_10007 Botrytis cinerea BC1G_10007 N 0.704
CAOG_07850 Capsaspora owczarzaki CAOG_07850 N 0.704
MGYG_05886 Microsporum gypseum MGYG_05886 N 0.704
MCYG_06073 Microsporum canis MCYG_06073 N 0.704
GLRG_06614 Colletotrichum graminicola GLRG_06614 N 0.704
EDO07903.1 Babesia bovis EDO07903.1 N 0.704