RO3G_06974 (Rhizopus oryzae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 RO3G_06974 T30445_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
RO3T_06973 RRM 244 314

Links

Other RRM family RBPs
Other Rhizopus oryzae RBPs

170 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_40585 Mucor circinelloides estExt_Genewise1Plus.C_40585 N 0.986
e_gw1.20.215.1 Phycomyces blakesleeanus e_gw1.20.215.1 N 0.915
estExt_Genewise1Plus.C_chr_40303 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40303 N 0.817
fgenesh1_pm.C_scaffold_9000117 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_9000117 N 0.803
PredSwiss_ASS2010_933.2 Pneumocystis carinii PredSwiss_ASS2010_933.2 N 0.803
estExt_Genewise1Plus.C_61472 Cryphonectria parasitica estExt_Genewise1Plus.C_61472 N 0.803
PredSwiss_CON599.3 Pneumocystis carinii PredSwiss_CON599.3 N 0.803
Pa_2_13850 Podospora anserina Pa_2_13850 N 0.789
NCU10166 Neurospora crassa NCU10166 N 0.789
PPIL4 Takifugu rubripes ENSTRUG00000006670 N 0.789
PPIL4 Oryzias latipes ENSORLG00000015310 N 0.789
ppil4 Danio rerio ENSDARG00000043854 N 0.789
SPPG_03169 Spizellomyces punctatus SPPG_03169 N 0.789
estExt_Genewise1Plus.C_12820 Neurospora discreta estExt_Genewise1Plus.C_12820 N 0.789
gw1.1.256.1 Neurospora tetrasperma gw1.1.256.1 N 0.789
e_gw1.6.80.1 Monosiga brevicollis e_gw1.6.80.1 N 0.789
estExt_Genewise1Plus.C_40228 Batrachochytrium dendrobatidis estExt_Genewise1Plus.C_40228 N 0.775
e_gw.42.57.1 Nematostella vectensis e_gw.42.57.1 N 0.775
PPIL4 Meleagris gallopavo ENSMGAG00000012596 N 0.775
e_gww2.22.65.1 Phanerochaete chrysosporium e_gww2.22.65.1 N 0.775
PPIL4 Gasterosteus aculeatus ENSGACG00000006639 N 0.775
PPIL4 Gallus gallus ENSGALG00000012364 N 0.775
PPIL4 Tetraodon nigroviridis ENSTNIG00000002706 N 0.775
ppil4 Xenopus tropicalis ENSXETG00000021385 N 0.775
SJAG_00470 Schizosaccharomyces japonicus SJAG_00470 N 0.775
cyp6 Schizosaccharomyces pombe SPBC17G9.05 N 0.775
estExt_fgenesh3_pg.C_910016 Postia placenta estExt_fgenesh3_pg.C_910016 N 0.775
estExt_fgenesh2_pm.C_1170007 Branchiostoma floridae estExt_fgenesh2_pm.C_1170007 N 0.775
fgenesh1_pm.00868_#_101 Aspergillus carbonarius fgenesh1_pm.00868_#_101 N 0.775
ENSCSAVG00000010619 Ciona savignyi ENSCSAVG00000010619 N 0.775
ENSOANG00000001063 Ornithorhynchus anatinus ENSOANG00000001063 N 0.775
CIMG_07762 Coccidioides immitis CIMG_07762 N 0.775
AO090038000594 Aspergillus oryzae CADAORAG00009343 N 0.775
UREG_02113 Uncinocarpus reesii UREG_02113 N 0.775
CPSG_09333 Coccidioides posadasii CPSG_09333 N 0.775
MGG_10681 Magnaporthe oryzae MGG_10681 N 0.775
NFIA_114890 Neosartorya fischeri CADNFIAG00010434 N 0.775
AFLA_071340 Aspergillus flavus CADAFLAG00008558 N 0.775
FVEG_11166 Fusarium verticillioides FVEG_11166 N 0.775
PABG_01156 Paracoccidioides brasiliensis PABG_01156 N 0.775
ANIA_09095 Aspergillus nidulans CADANIAG00009519 N 0.775
An12g00490 Aspergillus niger CADANGAG00009498 N 0.775
SPOG_01415 Schizosaccharomyces cryophilus SPOG_01415 N 0.775
AFUA_7G02170 Aspergillus fumigatus CADAFUAG00001177 N 0.775
ACLA_065360 Aspergillus clavatus CADACLAG00006149 N 0.775
BDBG_04009 Blastomyces dermatitidis BDBG_04009 N 0.775
FOXG_13736 Fusarium oxysporum FOXG_13736 N 0.775
HCAG_04417 Histoplasma capsulatum HCAG_04417 N 0.775
Pc21g11960 Penicillium chrysogenum Pc21g11960 N 0.761
XP_001192414.1 Strongylocentrotus purpuratus XP_001192414.1 N 0.761
XP_001180629.1 Strongylocentrotus purpuratus XP_001180629.1 N 0.761
PMAA_010740 Penicillium marneffei PMAA_010740 N 0.761
FGSG_04479 Fusarium graminearum FGSG_04479 N 0.761
fgenesh2_pm.4_#_1016 Serpula lacrymans fgenesh2_pm.4_#_1016 N 0.761
LOAG_08216 Loa loa LOAG_08216 N 0.761
TRV_03115 Trichophyton verrucosum TRV_03115 N 0.761
fgenesh1_pm.sca_11_chr8_3_0000173 Nectria haematococca fgenesh1_pm.sca_11_chr8_3_0000173 N 0.761
TERG_06028 Trichophyton rubrum TERG_06028 N 0.761
TEQG_07016 Trichophyton equinum TEQG_07016 N 0.761
fgenesh1_pm.C_scaffold_1000049 Schizophyllum commune fgenesh1_pm.C_scaffold_1000049 N 0.761
e_gww1.4.788.1 Laccaria bicolor e_gww1.4.788.1 N 0.761
MGYG_05886 Microsporum gypseum MGYG_05886 N 0.761
Ame_R008665 Ailuropoda melanoleuca Ame_R008665 N 0.761
nasonia_NCBI_hmm783174 Nasonia vitripennis nasonia_NCBI_hmm783174 N 0.761
PPIL4 Tursiops truncatus ENSTTRG00000006014 N 0.761
MCYG_06073 Microsporum canis MCYG_06073 N 0.761
estExt_fgenesh2_kg.C_140159 Agaricus bisporus estExt_fgenesh2_kg.C_140159 N 0.761
PPIL4 Vicugna pacos ENSVPAG00000005157 N 0.761
PPIL4 Gorilla gorilla ENSGGOG00000009686 N 0.761
PPIL4 Homo sapiens ENSG00000131013 N 0.761
PPIL4 Loxodonta africana ENSLAFG00000026804 N 0.761
PPIL4 Microcebus murinus ENSMICG00000006287 N 0.761
PPIL4 Monodelphis domestica ENSMODG00000016825 N 0.761
PPIL4 Macaca mulatta ENSMMUG00000023067 N 0.761
XP_787384.2 Strongylocentrotus purpuratus XP_787384.2 N 0.761
PPIL4 Equus caballus ENSECAG00000021819 N 0.761
A6QP53_BOVIN Bos taurus ENSBTAG00000016980 N 0.761
PPIL4 Anolis carolinensis ENSACAG00000006936 N 0.761
Q6JDI1_CANFA Canis familiaris ENSCAFG00000000379 N 0.761
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.761
PPIL4 Cavia porcellus ENSCPOG00000014614 N 0.761
ARB_04672 Arthroderma benhamiae ARB_04672 N 0.761
Ppil4 Mus musculus ENSMUSG00000015757 N 0.761
PPIL4 Myotis lucifugus ENSMLUG00000002766 N 0.761
Ppil4 Rattus norvegicus ENSRNOG00000015552 N 0.761
PPIL4 Otolemur garnettii ENSOGAG00000014153 N 0.761
PPIL4 Ochotona princeps ENSOPRG00000005619 N 0.761
PPIL4 Procavia capensis ENSPCAG00000008203 N 0.761
XP_782627.2 Strongylocentrotus purpuratus XP_782627.2 N 0.761
PPIL4 Sorex araneus ENSSARG00000011244 N 0.761
PPIL4 Pteropus vampyrus ENSPVAG00000000746 N 0.761
PPIL4 Pan troglodytes ENSPTRG00000018692 N 0.761
PPIL4 Taeniopygia guttata ENSTGUG00000010655 N 0.761
PPIL4 Oryctolagus cuniculus ENSOCUG00000007696 N 0.761
ATEG_01850 Aspergillus terreus CADATEAG00001841 N 0.761
fgenesh1_pm.C_scaffold_3000471 Trichoderma virens fgenesh1_pm.C_scaffold_3000471 N 0.746
PTRG_04608 Pyrenophora tritici repentis PTRG_04608 N 0.746
PGTG_10482 Puccinia graminis PGTG_10482 N 0.746
estExt_GeneWisePlus.C_270056 Trichoderma reesei estExt_GeneWisePlus.C_270056 N 0.746
fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.746
AB03196.1 Alternaria brassicicola AB03196.1 N 0.746
e_gw1.4.2113.1 Pleurotus ostreatus e_gw1.4.2113.1 N 0.746
BC1G_10007 Botrytis cinerea BC1G_10007 N 0.746
EAT81165.2 Phaeosphaeria nodorum EAT81165.2 N 0.746
gwEuk.12.143.1 Ostreococcus lucimarinus gwEuk.12.143.1 N 0.746
estExt_Genewise1Plus.C_11662 Tremella mesenterica estExt_Genewise1Plus.C_11662 N 0.746
CHGG_06839 Chaetomium globosum CHGG_06839 N 0.746
PHUM268300 Pediculus humanus PHUM268300 N 0.746
GF18772 Drosophila ananassae FBgn0095789 N 0.746
PPIL4 Spermophilus tridecemlineatus ENSSTOG00000013980 N 0.746
estExt_Genewise1.C_30053 Myceliophthora thermophila estExt_Genewise1.C_30053 N 0.746
GI24038 Drosophila mojavensis FBgn0146761 N 0.746
GJ23668 Drosophila virilis FBgn0210765 N 0.746
GL13859 Drosophila persimilis FBgn0151464 N 0.746
PPIL4 Erinaceus europaeus ENSEEUG00000000959 N 0.746
CBN08292 Caenorhabditis brenneri CBN08292 N 0.746
SOCG_02586 Schizosaccharomyces octosporus SOCG_02586 N 0.746
SNOG_11457 Stagonospora nodorum SNOG_11457 N 0.746
UM03490 Ustilago maydis UM03490 N 0.746
amel4_ncbi_hmm11961 Apis mellifera amel4_ncbi_hmm11961 N 0.746
amel4_ncbi_hmm35613 Apis mellifera amel4_ncbi_hmm35613 N 0.746
GA26948-RA Drosophila pseudoobscura FBgn0248319 N 0.746
GH18460 Drosophila grimshawi FBgn0125927 N 0.746
e_gw1.11.236.1 Trichoderma atroviride e_gw1.11.236.1 N 0.746
estExt_fgenesh1_kg.C_170006 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_170006 N 0.746
estExt_Genewise1.C_23809 Thielavia terrestris estExt_Genewise1.C_23809 N 0.746
estExt_fgenesh1_kg.C_40083 Melampsora laricis populina estExt_fgenesh1_kg.C_40083 N 0.746
CRE29496 Caenorhabditis remanei CRE29496 N 0.732
VDBG_02138 Verticillium albo atrum VDBG_02138 N 0.732
sig-7 Caenorhabditis elegans F39H2.2 N 0.732
CAOG_07850 Capsaspora owczarzaki CAOG_07850 N 0.732
BGIBMGA008977 Bombyx mori BGIBMGA008977 N 0.732
fgeneshTA2_pg.C_scaffold_8000290 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_8000290 N 0.732
AGAP008136 Anopheles gambiae AGAP008136 N 0.732
WUBG_04730 Wuchereria bancrofti WUBG_04730 N 0.732
CBG12494 Caenorhabditis briggsae CBG12494 N 0.732
CNBG_1409 Cryptococcus neoformans CNBG_1409 N 0.732
VDAG_02606 Verticillium dahliae VDAG_02606 N 0.732
CJA06296 Caenorhabditis japonica CJA06296 N 0.732
CG5808 Drosophila melanogaster FBgn0027617 N 0.732
PGTG_14680 Puccinia graminis PGTG_14680 N 0.732
83285 Helobdella robusta 83285 N 0.732
EuGene.1200010297 Ostreococcus RCC809 EuGene.1200010297 N 0.732
PTSG_07932 Salpingoeca rosetta PTSG_07932 N 0.732
PTTG_06854 Puccinia triticina PTTG_06854 N 0.732
GE10772 Drosophila yakuba FBgn0228614 N 0.732
GM23461 Drosophila sechellia FBgn0178328 N 0.732
GD18267 Drosophila simulans FBgn0189800 N 0.732
GG12319 Drosophila erecta FBgn0104609 N 0.732
GSTUMT00009813001 Tuber melanosporum GSTUMT00009813001 N 0.732
Aqu1.223583 Amphimedon queenslandica Aqu1.223583 N 0.732
AAEL005541 Aedes aegypti AAEL005541 N 0.718
GLRG_06614 Colletotrichum graminicola GLRG_06614 N 0.718
estExt_Genewise1.C_180101 Capitella teleta estExt_Genewise1.C_180101 N 0.718
SNAPOd2T00004354001 Oikopleura dioica SNAPOd2T00004354001 N 0.718
AAEL005690 Aedes aegypti AAEL005690 N 0.718
gw1.13.70.1 Lottia gigantea gw1.13.70.1 N 0.718
e_gw1.4.370.1 Sporobolomyces roseus e_gw1.4.370.1 N 0.718
e_gw1.6.1078.1 Selaginella moellendorfii e_gw1.6.1078.1 N 0.718
CpipJ_CPIJ000912 Culex pipiens CpipJ_CPIJ000912 N 0.718
CPIJ000912 Culex quinquefasciatus CPIJ000912 N 0.718
gw1.12.00.150.1 Ostreococcus tauri gw1.12.00.150.1 N 0.718
PPIL4 Callithrix jacchus ENSCJAG00000019613 N 0.708
e_gw1.4.423.1 Coccomyxa C 169 e_gw1.4.423.1 N 0.704
Sjc_0091550 Schistosoma japonicum Sjc_0091550 N 0.704
GK13166 Drosophila willistoni FBgn0215175 N 0.704
estExt_fgeneshCV_pg.C_40316 Chlorella vulgaris estExt_fgeneshCV_pg.C_40316 N 0.704
PierreAnnot2.00074 Micromonas pusilla PierreAnnot2.00074 N 0.704
Minc10084 Meloidogyne incognita Minc10084 N 0.704
Smp_165540 Schistosoma mansoni Smp_165540 N 0.704