CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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estExt_fgenesh2_kg.C_140159
(
Agaricus bisporus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
estExt_fgenesh2_kg.C_140159
T56269_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_kg.C_140159
RRM
257
327
LFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKKTGDSLQYAFIEFDKRDDAEQAYFKMQNVLVDDRRIW
Links
Other
RRM
family RBPs
Other
Agaricus bisporus
RBPs
176 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL009235
Aedes aegypti
AAEL009235
N
0.000
AGAP005641
Anopheles gambiae
AGAP005641
N
0.000
CpipJ_CPIJ008535
Culex pipiens
CpipJ_CPIJ008535
N
0.000
CPIJ008535
Culex quinquefasciatus
CPIJ008535
N
0.000
GF23931
Drosophila ananassae
FBgn0100925
N
0.000
GG13577
Drosophila erecta
FBgn0105847
N
0.000
GH16224
Drosophila grimshawi
FBgn0123695
N
0.000
CG9705
Drosophila melanogaster
FBgn0036661
N
0.000
GI13370
Drosophila mojavensis
FBgn0136127
N
0.000
GA21978-RA
Drosophila pseudoobscura
FBgn0081963
N
0.000
GM25657
Drosophila sechellia
FBgn0180514
N
0.000
GD14664
Drosophila simulans
FBgn0186342
N
0.000
GJ13199
Drosophila virilis
FBgn0200425
N
0.000
GK16809
Drosophila willistoni
FBgn0218809
N
0.000
GE19874
Drosophila yakuba
FBgn0237204
N
0.000