CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MDP0000286430
(
Malus x domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MDP0000286430
T57575_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000286430
RRM
8
76
LFIGGLAWDTNEDKLTDYFNQYGDVTQTVIMRDKVTGRPRGFGFVVFSDPSLIDRVLNDKHTIDGRLLF
MDP0000286430
RRM
133
202
IFVGGLPSTLTEDGFREFFENYGTVTDVVIMYDQNTQRPRGFGFITFDTEDAVDGVLQKNYHELNGKLVE
Links
Other
RRM
family RBPs
Other
Malus x domestica
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XM_002892513.1
Arabidopsis lyrata
fgenesh2_kg.1__1097__AT1G10320.1
N
0.000
AT1G10320
Arabidopsis thaliana
AT1G10320-TAIR-G
N
0.000
PK13905.1
Cannabis sativa
PK13905.1
N
0.000
Glyma15g39220.1
Glycine max
Glyma15g39220.1
N
0.000
Glyma08g17310.1
Glycine max
Glyma08g17310.1
N
0.000
MDP0000172441
Malus x domestica
MDP0000172441
N
0.000
mgf026159m
Mimulus guttatus
mgf026159m
N
0.000
BGIOSIBCE007424
Oryza indica
BGIOSIBCE007424
N
0.000
LOC_Os02g35150
Oryza sativa
LOC_Os02g35150
N
0.000
29609.m000599
Ricinus communis
29609.m000599
N
0.000
GSVIVG00023150001
Vitis vinifera
GSVIVG00023150001
N
0.000