CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CBN12329
(
Caenorhabditis brenneri
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
CBN12329
T60219_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN12329
S1
232
306
AAEVGKIYDGRVNSIQSFGAFITLDGFRQKQEGLCHISQLCKERVQAVADVLKRGQNVKVKVQKIENGKMSLTMK
Links
Other
S1
family RBPs
Other
Caenorhabditis brenneri
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBN09841
Caenorhabditis brenneri
CBN09841
N
0.000
CBG05375
Caenorhabditis briggsae
CBG05375
N
0.000
CBG05376
Caenorhabditis briggsae
CBG05376
N
0.000
CBG05418
Caenorhabditis briggsae
CBG05418
N
0.000
EEED8
Caenorhabditis elegans
EEED8
N
0.840
CRE12119
Caenorhabditis remanei
CRE12119
N
0.000
CRE12048
Caenorhabditis remanei
CRE12048
N
0.000
CRE30215
Caenorhabditis remanei
CRE30215
N
0.000
CRE30216
Caenorhabditis remanei
CRE30216
N
0.000
CRE30217
Caenorhabditis remanei
CRE30217
N
0.000
CRE30220
Caenorhabditis remanei
CRE30220
N
0.000
CRE30214
Caenorhabditis remanei
CRE30214
N
0.000