CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC17
(
Taeniopygia guttata
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSTGUG00000000817
T60551_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000000837
S1
1
65
QVAAVTDFGAFIRIPGCRKQGLVHRSQLSSCPVDSPAEMLAVGDRVWVKLIGREMKDDKLKLSLS
Links
Other
S1
family RBPs
Other
Taeniopygia guttata
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_04373
Arthroderma benhamiae
ARB_04373
N
0.000
e_gw1.00129.522.1
Aspergillus carbonarius
e_gw1.00129.522.1
N
0.000
ACLA_014960
Aspergillus clavatus
CADACLAG00001282
N
0.000
AFUA_5G11930
Aspergillus fumigatus
CADAFUAG00006332
N
0.000
ANIA_00109
Aspergillus nidulans
CADANIAG00002640
N
0.000
An18g02460
Aspergillus niger
CADANGAG00013880
N
0.000
AO090120000314
Aspergillus oryzae
CADAORAG00011453
N
0.000
ATEG_02080
Aspergillus terreus
CADATEAG00007708
N
0.000
BDBG_07806
Blastomyces dermatitidis
BDBG_07806
I
0.000
CIMG_09202
Coccidioides immitis
CIMG_09202
N
0.000
CPSG_03752
Coccidioides posadasii
CPSG_03752
N
0.000
HCAG_02639
Histoplasma capsulatum
HCAG_02639
N
0.000
MGG_07085
Magnaporthe oryzae
MGG_07085
I
0.000
MCYG_05162
Microsporum canis
MCYG_05162
N
0.000
MGYG_06202
Microsporum gypseum
MGYG_06202
N
0.000
NFIA_075370
Neosartorya fischeri
CADNFIAG00007887
N
0.000
PABG_04932
Paracoccidioides brasiliensis
PABG_04932
N
0.000
Pc21g07040
Penicillium chrysogenum
Pc21g07040
N
0.000
PMAA_031140
Penicillium marneffei
PMAA_031140
N
0.000
SS1G_08579
Sclerotinia sclerotiorum
SS1G_08579
N
0.000
TEQG_04632
Trichophyton equinum
TEQG_04632
N
0.000
TERG_06343
Trichophyton rubrum
TERG_06343
N
0.000
TESG_03846
Trichophyton tonsurans
TESG_03846
N
0.000
TRV_03163
Trichophyton verrucosum
TRV_03163
N
0.000
UREG_05248
Uncinocarpus reesii
UREG_05248
N
0.000