CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UREG_05248
(
Uncinocarpus reesii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
UREG_05248
T31354_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
URET_05248
RRM
918
987
VRNLEERVKVDQLKEALSEIFAEYGSILEIVAKSNLKAKGQAFIVFDNVDSATRAIEEINGFELFEKPMV
URET_05248
RRM
1077
1140
LFLREVPDSYDSAGLTAIFGRFEGFKEVRMVPGRKGIAFVEYESEAGAISAKEATSGMTLGENG
Links
Other
RRM
family RBPs
Other
Uncinocarpus reesii
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CIMG_09202
Coccidioides immitis
CIMG_09202
N
0.904
CPSG_03752
Coccidioides posadasii
CPSG_03752
N
0.904
TEQG_04632
Trichophyton equinum
TEQG_04632
N
0.860
TESG_03846
Trichophyton tonsurans
TESG_03846
N
0.860
TRV_03163
Trichophyton verrucosum
TRV_03163
N
0.859
PABG_04932
Paracoccidioides brasiliensis
PABG_04932
N
0.859
BDBG_07806
Blastomyces dermatitidis
BDBG_07806
I
0.854
ARB_04373
Arthroderma benhamiae
ARB_04373
N
0.853
HCAG_02639
Histoplasma capsulatum
HCAG_02639
N
0.839
TERG_06343
Trichophyton rubrum
TERG_06343
N
0.838
MGYG_06202
Microsporum gypseum
MGYG_06202
N
0.838
MCYG_05162
Microsporum canis
MCYG_05162
N
0.838
ATEG_02080
Aspergillus terreus
CADATEAG00007708
N
0.828
ACLA_014960
Aspergillus clavatus
CADACLAG00001282
N
0.806
AFUA_5G11930
Aspergillus fumigatus
CADAFUAG00006332
N
0.800
ANIA_00109
Aspergillus nidulans
CADANIAG00002640
N
0.797
Pc21g07040
Penicillium chrysogenum
Pc21g07040
N
0.794
An18g02460
Aspergillus niger
CADANGAG00013880
N
0.791
AO090120000314
Aspergillus oryzae
CADAORAG00011453
N
0.784
NFIA_075370
Neosartorya fischeri
CADNFIAG00007887
N
0.774
e_gw1.00129.522.1
Aspergillus carbonarius
e_gw1.00129.522.1
N
0.772
PMAA_031140
Penicillium marneffei
PMAA_031140
N
0.770