rpb7 (Schizosaccharomyces pombe)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 SPACUNK4.06c T60783_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SPACUNK4.06c-1 S1 81 160

Links

Other S1 family RBPs
Other Schizosaccharomyces pombe RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RPB7 Candida albicans orf19.3347 N 0.711
Cd36_01440 Candida dubliniensis Cd36_01440 N 0.711
PGUG_02831 Candida guilliermondii PGUG_02831 N 0.707
CPAG_00867 Candida parapsilosis CPAG_00867 N 0.711
CC1G_04529 Coprinopsis cinerea CC1G_04529 N 0.700
DEHA0G08195g Debaryomyces hansenii DEHA0G08195g N 0.711
LELG_01428 Lodderomyces elongisporus LELG_01428 N 0.711
estExt_Genewise1Plus.C_31798 Mucor circinelloides estExt_Genewise1Plus.C_31798 N 0.725
fgenesh1_pg.C_chr_1.1000254 Pichia stipitis fgenesh1_pg.C_chr_1.1000254 N 0.711
PredSwiss_CON2711.1 Pneumocystis carinii PredSwiss_CON2711.1 N 0.720
PredSwiss_ASS2010_1331.1 Pneumocystis carinii PredSwiss_ASS2010_1331.1 N 0.725
SPOG_03808 Schizosaccharomyces cryophilus SPOG_03808 N 0.938
SJAG_01436 Schizosaccharomyces japonicus SJAG_01436 N 0.925
SOCG_01722 Schizosaccharomyces octosporus SOCG_01722 N 0.925
estExt_fgenesh2_kg.C_101139 Serpula lacrymans estExt_fgenesh2_kg.C_101139 N 0.700
YALI0D11627g Yarrowia lipolytica YALI0D11627g N 0.750