SPOG_03722 (Schizosaccharomyces cryophilus)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		SPOG_03722 T00325_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SPOG_03722T0 CCCH ZF 13 39
SPOG_03722T0 RRM 70 135
SPOG_03722T0 CCCH ZF 143 169

Links

Other CCCH ZF,RRM family RBPs
Other Schizosaccharomyces cryophilus RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SOCG_04535 Schizosaccharomyces octosporus SOCG_04535 N 0.975
SJAG_00225 Schizosaccharomyces japonicus SJAG_00225 N 0.917
SPAP8A3.06 Schizosaccharomyces pombe SPAP8A3.06 N 0.892
PredSwiss_ASS2010_1021.1 Pneumocystis carinii PredSwiss_ASS2010_1021.1 N 0.800
PredSwiss_CON3041.3 Pneumocystis carinii PredSwiss_CON3041.3 N 0.800
PMAA_016150 Penicillium marneffei PMAA_016150 N 0.733
CHGG_01857 Chaetomium globosum CHGG_01857 N 0.730
NCU03261 Neurospora crassa NCU03261 N 0.721
estExt_fgenesh3_kg.C_70195 Neurospora discreta estExt_fgenesh3_kg.C_70195 N 0.721
estExt_Genewise1Plus.C_50321 Neurospora tetrasperma estExt_Genewise1Plus.C_50321 N 0.721
Pa_1_2890 Podospora anserina Pa_1_2890 N 0.715
PTRG_10702 Pyrenophora tritici repentis PTRG_10702 N 0.708
AB00394.1 Alternaria brassicicola AB00394.1 N 0.708
estExt_Genewise1.C_sca_3_chr4_2_00935 Nectria haematococca estExt_Genewise1.C_sca_3_chr4_2_00935 N 0.708
estExt_Genewise1Plus.C_31771 Mucor circinelloides estExt_Genewise1Plus.C_31771 N 0.708
fgenesh1_pg.C_scaffold_49000019 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_49000019 N 0.708
estExt_Genewise1.C_270092 Cochliobolus heterostrophus C5 estExt_Genewise1.C_270092 N 0.708
GLRG_01478 Colletotrichum graminicola GLRG_01478 N 0.707
MGG_09948 Magnaporthe oryzae MGG_09948 N 0.702
estExt_Genewise1Plus.C_51141 Cryphonectria parasitica estExt_Genewise1Plus.C_51141 N 0.702
CIMG_04462 Coccidioides immitis CIMG_04462 N 0.702
EAT83092.1 Phaeosphaeria nodorum EAT83092.1 N 0.700
SNOG_09827 Stagonospora nodorum SNOG_09827 N 0.700
RO3G_03843 Rhizopus oryzae RO3G_03843 N 0.700