EAT83092.1 (Phaeosphaeria nodorum)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		EAT83092.1 T01019_0.6 NCBI (2013-Jan-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
EAT83092.1 CCCH ZF 13 39
EAT83092.1 RRM 70 134
EAT83092.1 CCCH ZF 142 168

Links

Other CCCH ZF,RRM family RBPs
Other Phaeosphaeria nodorum RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SNOG_09827 Stagonospora nodorum SNOG_09827 N 1.000
estExt_Genewise1.C_270092 Cochliobolus heterostrophus C5 estExt_Genewise1.C_270092 N 0.992
PTRG_10702 Pyrenophora tritici repentis PTRG_10702 N 0.992
AB00394.1 Alternaria brassicicola AB00394.1 N 0.992
estExt_Genewise1.C_sca_3_chr4_2_00935 Nectria haematococca estExt_Genewise1.C_sca_3_chr4_2_00935 N 0.908
CHGG_01857 Chaetomium globosum CHGG_01857 N 0.901
VDAG_04200 Verticillium dahliae VDAG_04200 N 0.893
VDBG_04657 Verticillium albo atrum VDBG_04657 N 0.893
estExt_fgenesh3_kg.C_70195 Neurospora discreta estExt_fgenesh3_kg.C_70195 N 0.893
NCU03261 Neurospora crassa NCU03261 N 0.893
estExt_Genewise1Plus.C_50321 Neurospora tetrasperma estExt_Genewise1Plus.C_50321 N 0.893
fgenesh1_pg.C_scaffold_49000019 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_49000019 N 0.891
PMAA_016150 Penicillium marneffei PMAA_016150 N 0.891
AFLA_090330 Aspergillus flavus CADAFLAG00008718 N 0.887
AO090120000034 Aspergillus oryzae CADAORAG00011213 N 0.887
ACLA_061920 Aspergillus clavatus CADACLAG00005985 N 0.886
An01g01060 Aspergillus niger CADANGAG00000104 N 0.886
ANIA_09362 Aspergillus nidulans CADANIAG00001149 N 0.886
ATEG_07467 Aspergillus terreus CADATEAG00003016 N 0.886
Pa_1_2890 Podospora anserina Pa_1_2890 N 0.885
FGSG_06860 Fusarium graminearum FGSG_06860 N 0.885
FOXG_01966 Fusarium oxysporum FOXG_01966 N 0.885
FVEG_05126 Fusarium verticillioides FVEG_05126 N 0.885
AFUA_3G02380 Aspergillus fumigatus CADAFUAG00000282 N 0.879
fgenesh1_pg.00771_#_421 Aspergillus carbonarius fgenesh1_pg.00771_#_421 N 0.879
NFIA_003540 Neosartorya fischeri CADNFIAG00000551 N 0.879
estExt_Genewise1Plus.C_51141 Cryphonectria parasitica estExt_Genewise1Plus.C_51141 N 0.878
GLRG_01478 Colletotrichum graminicola GLRG_01478 N 0.877
CIMG_04462 Coccidioides immitis CIMG_04462 N 0.870
MGG_09948 Magnaporthe oryzae MGG_09948 N 0.862
MCYG_05692 Microsporum canis MCYG_05692 N 0.862
MGYG_02786 Microsporum gypseum MGYG_02786 N 0.862
TESG_04620 Trichophyton tonsurans TESG_04620 N 0.862
CPSG_06303 Coccidioides posadasii CPSG_06303 N 0.862
TERG_06877 Trichophyton rubrum TERG_06877 N 0.862
GSTUMT00005341001 Tuber melanosporum GSTUMT00005341001 N 0.857
BDBG_04724 Blastomyces dermatitidis BDBG_04724 N 0.848
SS1G_04229 Sclerotinia sclerotiorum SS1G_04229 N 0.840
BC1G_10530 Botrytis cinerea BC1G_10530 N 0.840
estExt_Genewise1.C_chr_10003 Mycosphaerella graminicola estExt_Genewise1.C_chr_10003 N 0.832
PredSwiss_ASS2010_1021.1 Pneumocystis carinii PredSwiss_ASS2010_1021.1 N 0.742
PredSwiss_CON3041.3 Pneumocystis carinii PredSwiss_CON3041.3 N 0.742
SPAP8A3.06 Schizosaccharomyces pombe SPAP8A3.06 N 0.739
SJAG_00225 Schizosaccharomyces japonicus SJAG_00225 N 0.731
SOCG_04535 Schizosaccharomyces octosporus SOCG_04535 N 0.714
SPOG_03722 Schizosaccharomyces cryophilus SPOG_03722 N 0.700