rbm22 (Xenopus tropicalis)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		ENSXETG00000020435 T00657_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000044114 CCCH ZF 163 185
ENSXETP00000044114 RRM 234 299

Links

Other CCCH ZF,RRM family RBPs
Other Xenopus tropicalis RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH45067 Xenopus laevis AAH45067 N 0.978
RBM22 Monodelphis domestica ENSMODG00000009574 N 0.978
Q7ZXB5 Xenopus laevis Q7ZXB5 N 0.978
RBM22_CHICK Gallus gallus ENSGALG00000004555 N 0.966
RBM22 Meleagris gallopavo ENSMGAG00000006298 N 0.966
RBM22 Taeniopygia guttata ENSTGUG00000000850 N 0.966
RBM22 Macaca mulatta ENSMMUG00000020683 N 0.955
RBM22 Gorilla gorilla ENSGGOG00000012947 N 0.955
Rbm22 Dipodomys ordii ENSDORG00000005329 N 0.955
ENSEEUG00000005638 Erinaceus europaeus ENSEEUG00000005638 N 0.955
RBM22 Loxodonta africana ENSLAFG00000006638 N 0.955
ENSOPRG00000008481 Ochotona princeps ENSOPRG00000008481 N 0.955
RBM22 Pan troglodytes ENSPTRG00000017423 N 0.955
RBM22 Pteropus vampyrus ENSPVAG00000014231 N 0.955
RBM22 Tursiops truncatus ENSTTRG00000012778 N 0.955
ENSPPYG00000015955 Pongo pygmaeus ENSPPYG00000015955 N 0.955
RBM22 Procavia capensis ENSPCAG00000015091 N 0.955
RBM22 Oryctolagus cuniculus ENSOCUG00000011532 N 0.955
RBM22 Dasypus novemcinctus ENSDNOG00000011166 N 0.955
Rbm22 Mus musculus ENSMUSG00000024604 N 0.955
RBM22 Homo sapiens ENSG00000086589 N 0.955
ENSCHOG00000004192 Choloepus hoffmanni ENSCHOG00000004192 N 0.955
RBM22 Canis familiaris ENSCAFG00000018082 N 0.955
RBM22_BOVIN Bos taurus ENSBTAG00000035397 N 0.955
RBM22 Anolis carolinensis ENSACAG00000014750 N 0.955
ENSCHOG00000013522 Choloepus hoffmanni ENSCHOG00000013522 N 0.955
RBM22_BOVIN Bos taurus ENSBTAG00000030366 N 0.955
RBM22 Cavia porcellus ENSCPOG00000001946 N 0.955
RBM22 Callithrix jacchus ENSCJAG00000020963 N 0.955
Rbm22 Rattus norvegicus ENSRNOG00000019235 N 0.944
ENSCHOG00000001041 Choloepus hoffmanni ENSCHOG00000001041 N 0.944
ENSMODG00000006398 Monodelphis domestica ENSMODG00000006398 N 0.944
ENSMLUG00000003461 Myotis lucifugus ENSMLUG00000003461 N 0.933
RBM22 Ornithorhynchus anatinus ENSOANG00000002314 N 0.891
RBM22 Danio rerio ENSDARG00000010238 N 0.878
RBM22 Gasterosteus aculeatus ENSGACG00000018027 N 0.867
RBM22 Oryzias latipes ENSORLG00000004975 N 0.856
RBM22 Takifugu rubripes ENSTRUG00000004724 N 0.844
ENSMEUG00000009348 Macropus eugenii ENSMEUG00000009348 N 0.844
RBM22 Vicugna pacos ENSVPAG00000002066 N 0.809
estExt_fgenesh2_pm.C_1790010 Branchiostoma floridae estExt_fgenesh2_pm.C_1790010 N 0.800
gw.38.22.1 Branchiostoma floridae gw.38.22.1 N 0.800
PHUM268310 Pediculus humanus PHUM268310 N 0.733
amel4_ncbi_hmm34588 Apis mellifera amel4_ncbi_hmm34588 N 0.733
e_gw1.462.21.1 Capitella teleta e_gw1.462.21.1 N 0.725
e_gw1.11.24.1 Lottia gigantea e_gw1.11.24.1 N 0.722
ISCW021094 Ixodes scapularis ISCW021094 N 0.700
estExt_Genewise1Plus.C_940087 Daphnia pulex estExt_Genewise1Plus.C_940087 N 0.700