DGIL_AUG5s17350g1t1 (Acyrtosiphon pisum)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 DGIL_AUG5s17350g1t1 T01813_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
DGIL_AUG5s17350g1t1 CCCH ZF 73 95
DGIL_AUG5s17350g1t1 CCCH ZF 120 136
DGIL_AUG5s17350g1t1 CCCH ZF 267 293

Links

Other CCCH ZF family RBPs
Other Acyrtosiphon pisum RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm1068274 Nasonia vitripennis nasonia_NCBI_hmm1068274 N 0.881
GK12832 Drosophila willistoni FBgn0214841 N 0.821
e_gw.10.245.1 Nematostella vectensis e_gw.10.245.1 N 0.809
UNK Erinaceus europaeus ENSEEUG00000013779 N 0.761
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.754
XP_789013.2 Strongylocentrotus purpuratus XP_789013.2 N 0.750
XP_001180099.1 Strongylocentrotus purpuratus XP_001180099.1 N 0.750
Aqu1.225680 Amphimedon queenslandica Aqu1.225680 N 0.735
XR_022366.1 Pan troglodytes ENSPTRG00000007591 N 0.729
UNK Microcebus murinus ENSMICG00000007591 N 0.725
fgenesh2_pg.scaffold_5000153 Branchiostoma floridae fgenesh2_pg.scaffold_5000153 N 0.721
UNK Otolemur garnettii ENSOGAG00000001922 N 0.701
UNK Oryzias latipes ENSORLG00000018637 N 0.700