nasonia_NCBI_hmm1068274 (Nasonia vitripennis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 nasonia_NCBI_hmm1068274 T01823_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm1068274 CCCH ZF 66 87
nasonia_NCBI_hmm1068274 CCCH ZF 112 129
nasonia_NCBI_hmm1068274 CCCH ZF 263 289

Links

Other CCCH ZF family RBPs
Other Nasonia vitripennis RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s17350g1t1 Acyrtosiphon pisum DGIL_AUG5s17350g1t1 N 0.881
GK12832 Drosophila willistoni FBgn0214841 N 0.881
e_gw.10.245.1 Nematostella vectensis e_gw.10.245.1 N 0.838
XP_001180099.1 Strongylocentrotus purpuratus XP_001180099.1 N 0.824
XP_789013.2 Strongylocentrotus purpuratus XP_789013.2 N 0.824
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.797
UNK Erinaceus europaeus ENSEEUG00000013779 N 0.776
Aqu1.225680 Amphimedon queenslandica Aqu1.225680 N 0.765
fgenesh2_pg.scaffold_5000153 Branchiostoma floridae fgenesh2_pg.scaffold_5000153 N 0.765
XR_022366.1 Pan troglodytes ENSPTRG00000007591 N 0.757
ENSCSAVG00000004843 Ciona savignyi ENSCSAVG00000004843 N 0.739
UNK Microcebus murinus ENSMICG00000007591 N 0.739
WUBG_00870 Wuchereria bancrofti WUBG_00870 N 0.729
UNK Oryzias latipes ENSORLG00000018637 N 0.729
Smp_154250 Schistosoma mansoni Smp_154250 N 0.729
Bm1_37725 Brugia malayi Bm1_37725 N 0.729
Sjc_0008870 Schistosoma japonicum Sjc_0008870 N 0.729
LOAG_04272 Loa loa LOAG_04272 N 0.714
UNK Otolemur garnettii ENSOGAG00000001922 N 0.701