XP_001180099.1 (Strongylocentrotus purpuratus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 XP_001180099.1 T06605_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001180099.1 CCCH ZF 79 101
XP_001180099.1 CCCH ZF 126 143
XP_001180099.1 CCCH ZF 283 309

Links

Other CCCH ZF family RBPs
Other Strongylocentrotus purpuratus RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_789013.2 Strongylocentrotus purpuratus XP_789013.2 N 1.000
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.826
nasonia_NCBI_hmm1068274 Nasonia vitripennis nasonia_NCBI_hmm1068274 N 0.824
XR_022366.1 Pan troglodytes ENSPTRG00000007591 N 0.814
e_gw.10.245.1 Nematostella vectensis e_gw.10.245.1 N 0.812
fgenesh2_pg.scaffold_5000153 Branchiostoma floridae fgenesh2_pg.scaffold_5000153 N 0.783
UNK Microcebus murinus ENSMICG00000007591 N 0.783
Aqu1.225680 Amphimedon queenslandica Aqu1.225680 N 0.779
ENSCSAVG00000004843 Ciona savignyi ENSCSAVG00000004843 N 0.768
UNK Erinaceus europaeus ENSEEUG00000013779 N 0.765
GK12832 Drosophila willistoni FBgn0214841 N 0.765
Smp_154250 Schistosoma mansoni Smp_154250 N 0.757
Sjc_0008870 Schistosoma japonicum Sjc_0008870 N 0.757
DGIL_AUG5s17350g1t1 Acyrtosiphon pisum DGIL_AUG5s17350g1t1 N 0.750
XP_002155288.1 Hydra magnipapillata XP_002155288.1 N 0.746
UNK Oryzias latipes ENSORLG00000018637 N 0.743
UNK Otolemur garnettii ENSOGAG00000001922 N 0.721
WUBG_00870 Wuchereria bancrofti WUBG_00870 N 0.700
LOAG_04272 Loa loa LOAG_04272 N 0.700
Bm1_37725 Brugia malayi Bm1_37725 N 0.700