AT3G51120 (Arabidopsis thaliana)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 AT3G51120-TAIR-G T01906_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT3G51120.1-P CCCH ZF 1268 1292

Links

Other CCCH ZF family RBPs
Other Arabidopsis thaliana RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002877743.1 Arabidopsis lyrata scaffold_502165.1 N 1.000
B9NDJ8_POPTR Populus trichocarpa POPTR_0007s13760 N 0.800
POPTR_0005s11920 Populus trichocarpa POPTR_0005s11920 N 0.800
cassava18744.valid.m1 Manihot esculenta cassava18744.valid.m1 N 0.769
Glyma11g07890.1 Glycine max Glyma11g07890.1 N 0.760
chr2.CM0249.60.nd Lotus japonicus chr2.CM0249.60.nd N 0.720
28140.m000105 Ricinus communis 28140.m000105 N 0.720