BGIOSIBCE034418 (Oryza indica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 BGIOSIBCE034418 T01971_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE034418 CCCH ZF 20 45
BGIOSIBCE034418 CCCH ZF 65 90
BGIOSIBCE034418 CCCH ZF 229 255
BGIOSIBCE034418 CCCH ZF 275 301

Links

Other CCCH ZF family RBPs
Other Oryza indica RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G107491 Zea mays GRMZM2G107491 N 0.860
LOC_Os11g28270 Oryza sativa LOC_Os11g28270 N 0.783
LOC_Os01g68860 Oryza sativa LOC_Os01g68860 N 0.750
GRMZM2G087032 Zea mays GRMZM2G087032 N 0.738
Sb03g043810 Sorghum bicolor Sb03g043810 N 0.738
GSVIVG00019119001 Vitis vinifera GSVIVG00019119001 N 0.729