CBN23640 (Caenorhabditis brenneri)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 CBN23640 T02149_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CBN23640 CCCH ZF 156 182
CBN23640 CCCH ZF 199 225

Links

Other CCCH ZF family RBPs
Other Caenorhabditis brenneri RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CRE26079 Caenorhabditis remanei CRE26079 N 0.963
CBG20851 Caenorhabditis briggsae CBG20851 N 0.944
mex-1 Caenorhabditis elegans W03C9.7 N 0.926
CJA11631 Caenorhabditis japonica CJA11631 N 0.926
CBN18470 Caenorhabditis brenneri CBN18470 N 0.778
CBN24850 Caenorhabditis brenneri CBN24850 N 0.778
CJA09680 Caenorhabditis japonica CJA09680 N 0.759
CRE05531 Caenorhabditis remanei CRE05531 N 0.759
CBG23753 Caenorhabditis briggsae CBG23753 N 0.741
CBG11249 Caenorhabditis briggsae CBG11249 N 0.741
Ppa-mex-1 Pristionchus pacificus PPA07460 N 0.741
pos-1 Caenorhabditis elegans F52E1.1 N 0.722