pos-1 (Caenorhabditis elegans)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 F52E1.1 T03662_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
F52E1.1 CCCH ZF 99 125
F52E1.1 CCCH ZF 142 168

Links

Other CCCH ZF family RBPs
Other Caenorhabditis elegans RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG23753 Caenorhabditis briggsae CBG23753 N 0.926
CBG11249 Caenorhabditis briggsae CBG11249 N 0.907
CRE05531 Caenorhabditis remanei CRE05531 N 0.907
CBN24850 Caenorhabditis brenneri CBN24850 N 0.889
CBN18470 Caenorhabditis brenneri CBN18470 N 0.889
CJA09680 Caenorhabditis japonica CJA09680 N 0.833
CJA11631 Caenorhabditis japonica CJA11631 N 0.759
mex-1 Caenorhabditis elegans W03C9.7 N 0.741
CRE26079 Caenorhabditis remanei CRE26079 N 0.741
Y116A8C.19 Caenorhabditis elegans Y116A8C.19 N 0.722
Y116A8C.20 Caenorhabditis elegans Y116A8C.20 N 0.722
CBG20851 Caenorhabditis briggsae CBG20851 N 0.722
Ppa-mex-1 Pristionchus pacificus PPA07460 N 0.722
CBN23640 Caenorhabditis brenneri CBN23640 N 0.722
ccch-2 Caenorhabditis elegans F38C2.5 N 0.704
ccch-5 Caenorhabditis elegans Y57G11C.25 N 0.704