CBG11249 (Caenorhabditis briggsae)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 CBG11249 T02112_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CBG11249 CCCH ZF 101 127
CBG11249 CCCH ZF 144 170

Links

Other CCCH ZF family RBPs
Other Caenorhabditis briggsae RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG23753 Caenorhabditis briggsae CBG23753 N 0.981
CBN24850 Caenorhabditis brenneri CBN24850 N 0.944
CBN18470 Caenorhabditis brenneri CBN18470 N 0.944
CRE05531 Caenorhabditis remanei CRE05531 N 0.926
pos-1 Caenorhabditis elegans F52E1.1 N 0.907
CJA09680 Caenorhabditis japonica CJA09680 N 0.889
Y116A8C.20 Caenorhabditis elegans Y116A8C.20 N 0.796
dct-13 Caenorhabditis elegans Y116A8C.17 N 0.759
CRE26079 Caenorhabditis remanei CRE26079 N 0.759
CJA11631 Caenorhabditis japonica CJA11631 N 0.759
CBG20851 Caenorhabditis briggsae CBG20851 N 0.759
Y116A8C.19 Caenorhabditis elegans Y116A8C.19 N 0.741
CBN23640 Caenorhabditis brenneri CBN23640 N 0.741
mex-1 Caenorhabditis elegans W03C9.7 N 0.741
ccch-5 Caenorhabditis elegans Y57G11C.25 N 0.722
Ppa-mex-1 Pristionchus pacificus PPA07460 N 0.704
ccch-2 Caenorhabditis elegans F38C2.5 N 0.704