CJA09680 (Caenorhabditis japonica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 CJA09680 T02161_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CJA09680 CCCH ZF 99 125
CJA09680 CCCH ZF 142 168

Links

Other CCCH ZF family RBPs
Other Caenorhabditis japonica RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBN24850 Caenorhabditis brenneri CBN24850 N 0.944
CBN18470 Caenorhabditis brenneri CBN18470 N 0.944
CRE05531 Caenorhabditis remanei CRE05531 N 0.926
CBG23753 Caenorhabditis briggsae CBG23753 N 0.907
CBG11249 Caenorhabditis briggsae CBG11249 N 0.889
pos-1 Caenorhabditis elegans F52E1.1 N 0.833
CRE26079 Caenorhabditis remanei CRE26079 N 0.778
CBG20851 Caenorhabditis briggsae CBG20851 N 0.759
CBN23640 Caenorhabditis brenneri CBN23640 N 0.759
Y116A8C.20 Caenorhabditis elegans Y116A8C.20 N 0.759
CJA11631 Caenorhabditis japonica CJA11631 N 0.759
Y116A8C.19 Caenorhabditis elegans Y116A8C.19 N 0.759
dct-13 Caenorhabditis elegans Y116A8C.17 N 0.741
mex-1 Caenorhabditis elegans W03C9.7 N 0.722
F38C2.7 Caenorhabditis elegans F38C2.7 N 0.704
ccch-5 Caenorhabditis elegans Y57G11C.25 N 0.704
C35D6.4 Caenorhabditis elegans C35D6.4 N 0.704