ZFP36 (Canis familiaris)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSCAFG00000005530 T02295_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZFP36
M350_0.6 		Homo sapiens UUAUUUAWW SELEX
Cook et al.(2011)
951_12324455 		0.889
ZFP36
M269_0.6 		Homo sapiens UUAUUUAWW SELEX
Cook et al.(2011)
221_12324455 		0.889
ZFP36
M268_0.6 		Homo sapiens Sequence logo not available AUUUA RIP-chip
Cook et al.(2011)
194_18256032.1 		0.889
ZFP36
M267_0.6 		Homo sapiens Sequence logo not available UUAUUUAUU RIP-chip
Cook et al.(2011)
194_18256032 		0.889
ZFP36
M266_0.6 		Homo sapiens Sequence logo not available UUGUGS RIP-chip
Cook et al.(2011)
193_18367721.3 		0.889
ZFP36
M265_0.6 		Homo sapiens Sequence logo not available CUUGU RIP-chip
Cook et al.(2011)
193_18367721.2 		0.889
ZFP36
M264_0.6 		Homo sapiens Sequence logo not available HCYUBY RIP-chip
Cook et al.(2011)
193_18367721.1 		0.889
ZFP36
M263_0.6 		Homo sapiens Sequence logo not available AAUAA RIP-chip
Cook et al.(2011)
193_18367721 		0.889
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000008265 CCCH ZF 102 128
ENSCAFP00000008265 CCCH ZF 140 163

Links

Other CCCH ZF family RBPs
Other Canis familiaris RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZFP36 Pan troglodytes ENSPTRG00000010968 I 0.889
LOC100397247 Callithrix jacchus ENSCJAG00000014156 I 0.889
ZFP36 Oryctolagus cuniculus ENSOCUG00000003400 I 0.889
ZFP36 Pteropus vampyrus ENSPVAG00000011124 I 0.889
ZFP36 Sus scrofa ENSSSCG00000010708 I 0.889
Ame_R016002 Ailuropoda melanoleuca Ame_R016002 I 0.889
ZFP36 Tursiops truncatus ENSTTRG00000003564 I 0.889
ZFP36 Tupaia belangeri ENSTBEG00000005948 I 0.889
ZFP36 Myotis lucifugus ENSMLUG00000002942 I 0.889
ENSPPYG00000010577 Pongo pygmaeus ENSPPYG00000010577 I 0.889
ZFP36 Gorilla gorilla ENSGGOG00000014399 I 0.889
ZFP36 Homo sapiens ENSG00000128016 D 0.889
ZFP36 Cavia porcellus ENSCPOG00000011363 I 0.889
Zfp36 Mus musculus ENSMUSG00000044786 I 0.870
Zfp36 Dipodomys ordii ENSDORG00000013487 I 0.870
Zfp36 Rattus norvegicus ENSRNOG00000019673 I 0.852
zfp36 Xenopus tropicalis ENSXETG00000002899 I 0.778
AAI08849 Xenopus laevis AAI08849 I 0.778
AAH82435 Xenopus laevis AAH82435 I 0.778
AAD24207 Xenopus laevis AAD24207 I 0.778
ENSACAG00000009252 Anolis carolinensis ENSACAG00000009252 I 0.778
ZFP36 Monodelphis domestica ENSMODG00000013494 I 0.755
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.750
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.750
ZFP36 Macropus eugenii ENSMEUG00000010317 I 0.741
0300010273 Ostreococcus tauri 0300010273 I 0.731
ZFP36 Danio rerio ENSDARG00000044395 I 0.704
ENSORLG00000000589 Oryzias latipes ENSORLG00000000589 I 0.704
ENSGACG00000013400 Gasterosteus aculeatus ENSGACG00000013400 I 0.704
CABZ01070258.1 Danio rerio ENSDARG00000040503 I 0.704