Zfp36 (Mus musculus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSMUSG00000044786 T03008_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZFP36
M264_0.6 		Homo sapiens Sequence logo not available HCYUBY RIP-chip
Cook et al.(2011)
193_18367721.1 		0.981
ZFP36
M263_0.6 		Homo sapiens Sequence logo not available AAUAA RIP-chip
Cook et al.(2011)
193_18367721 		0.981
ZFP36
M350_0.6 		Homo sapiens UUAUUUAWW SELEX
Cook et al.(2011)
951_12324455 		0.981
ZFP36
M269_0.6 		Homo sapiens UUAUUUAWW SELEX
Cook et al.(2011)
221_12324455 		0.981
ZFP36
M268_0.6 		Homo sapiens Sequence logo not available AUUUA RIP-chip
Cook et al.(2011)
194_18256032.1 		0.981
ZFP36
M267_0.6 		Homo sapiens Sequence logo not available UUAUUUAUU RIP-chip
Cook et al.(2011)
194_18256032 		0.981
ZFP36
M266_0.6 		Homo sapiens Sequence logo not available UUGUGS RIP-chip
Cook et al.(2011)
193_18367721.3 		0.981
ZFP36
M265_0.6 		Homo sapiens Sequence logo not available CUUGU RIP-chip
Cook et al.(2011)
193_18367721.2 		0.981
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000057815 CCCH ZF 96 122
ENSMUSP00000057815 CCCH ZF 134 160

Links

Other CCCH ZF family RBPs
Other Mus musculus RBPs

119 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZFP36 Tupaia belangeri ENSTBEG00000005948 I 0.981
ENSPPYG00000010577 Pongo pygmaeus ENSPPYG00000010577 I 0.981
ZFP36 Pan troglodytes ENSPTRG00000010968 I 0.981
Zfp36 Rattus norvegicus ENSRNOG00000019673 I 0.981
ZFP36 Pteropus vampyrus ENSPVAG00000011124 I 0.981
Ame_R016002 Ailuropoda melanoleuca Ame_R016002 I 0.981
ZFP36 Sus scrofa ENSSSCG00000010708 I 0.981
LOC100397247 Callithrix jacchus ENSCJAG00000014156 I 0.981
ZFP36 Oryctolagus cuniculus ENSOCUG00000003400 I 0.981
ZFP36 Homo sapiens ENSG00000128016 D 0.981
ZFP36 Myotis lucifugus ENSMLUG00000002942 I 0.981
ZFP36 Cavia porcellus ENSCPOG00000011363 I 0.981
ZFP36 Tursiops truncatus ENSTTRG00000003564 I 0.981
ZFP36 Gorilla gorilla ENSGGOG00000014399 I 0.981
Zfp36 Dipodomys ordii ENSDORG00000013487 I 0.944
ZFP36 Canis familiaris ENSCAFG00000005530 I 0.870
ENSACAG00000009252 Anolis carolinensis ENSACAG00000009252 I 0.833
AAI08849 Xenopus laevis AAI08849 I 0.833
AAH82435 Xenopus laevis AAH82435 I 0.833
zfp36 Xenopus tropicalis ENSXETG00000002899 I 0.833
AAD24207 Xenopus laevis AAD24207 I 0.833
ZFP36 Macropus eugenii ENSMEUG00000010317 I 0.796
ENSORLG00000000589 Oryzias latipes ENSORLG00000000589 I 0.778
ZFP36 Monodelphis domestica ENSMODG00000013494 I 0.778
ENSTNIG00000019802 Tetraodon nigroviridis ENSTNIG00000019802 I 0.759
ENSTRUG00000003178 Takifugu rubripes ENSTRUG00000003178 I 0.759
Aqu1.221345 Amphimedon queenslandica Aqu1.221345 I 0.741
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.741
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.741
XP_001178437.1 Strongylocentrotus purpuratus XP_001178437.1 I 0.741
XP_782811.1 Strongylocentrotus purpuratus XP_782811.1 I 0.741
XP_001175665.1 Strongylocentrotus purpuratus XP_001175665.1 I 0.741
XP_001175810.1 Strongylocentrotus purpuratus XP_001175810.1 I 0.741
CABZ01070258.1 Danio rerio ENSDARG00000040503 I 0.741
ENSGACG00000013400 Gasterosteus aculeatus ENSGACG00000013400 I 0.741
ZFP36L2 Ornithorhynchus anatinus ENSOANG00000002848 I 0.722
AAH44086 Xenopus laevis AAH44086 I 0.722
Zfp36l2 Mus musculus ENSMUSG00000045817 I 0.722
ZFP36L2 Pan troglodytes ENSPTRG00000011870 I 0.722
ZFP36L2 Macropus eugenii ENSMEUG00000010649 I 0.722
ZFP36L2 Myotis lucifugus ENSMLUG00000015588 I 0.722
ZFP36L2 Microcebus murinus ENSMICG00000010318 I 0.722
ENSPPYG00000012458 Pongo pygmaeus ENSPPYG00000012458 I 0.722
ZFP36L2 Loxodonta africana ENSLAFG00000004265 I 0.722
ZFP36L2 Gorilla gorilla ENSGGOG00000001402 I 0.722
LOC100386590 Callithrix jacchus ENSCJAG00000014571 I 0.722
ZFP36L2 Monodelphis domestica ENSMODG00000000407 I 0.722
ZFP36L2 Homo sapiens ENSG00000152518 I 0.722
ZFP36L2 Canis familiaris ENSCAFG00000002438 I 0.722
Q1JP65_BOVIN Bos taurus ENSBTAG00000003553 I 0.722
amel4_ncbi_hmm10964 Apis mellifera amel4_ncbi_hmm10964 I 0.722
ZFP36L2 Anolis carolinensis ENSACAG00000014740 I 0.722
ZFP36 Gasterosteus aculeatus ENSGACG00000008344 I 0.722
Q7ZXW9 Xenopus laevis Q7ZXW9 I 0.722
Zfp36l2 Rattus norvegicus ENSRNOG00000005067 I 0.722
zfp36l2 Xenopus tropicalis ENSXETG00000009274 I 0.722
e_gw.346.37.1 Nematostella vectensis e_gw.346.37.1 I 0.722
ZFP36L2 Tupaia belangeri ENSTBEG00000012370 I 0.722
Zfp36l3 Rattus norvegicus ENSRNOG00000029788 I 0.722
ENSSSCG00000008460 Sus scrofa ENSSSCG00000008460 I 0.722
ZFP36L2 Sus scrofa ENSSSCG00000008461 I 0.722
estExt_fgenesh2_pg.C_680108 Branchiostoma floridae estExt_fgenesh2_pg.C_680108 I 0.722
ZFP36L2 Tursiops truncatus ENSTTRG00000006356 I 0.722
0300010273 Ostreococcus tauri 0300010273 I 0.722
Ame_R000168 Ailuropoda melanoleuca Ame_R000168 I 0.722
ZFP36L1 Tarsius syrichta ENSTSYG00000009284 I 0.704
ZFP36L1 Oryctolagus cuniculus ENSOCUG00000003168 I 0.704
ZFP36L1 Homo sapiens ENSG00000185650 I 0.704
ZFP36L1 Takifugu rubripes ENSTRUG00000012295 I 0.704
ENSGACG00000008351 Gasterosteus aculeatus ENSGACG00000008351 I 0.704
LOC100063597 Equus caballus ENSECAG00000018860 I 0.704
zfp36l1b Danio rerio ENSDARG00000021443 I 0.704
ZFP36L1 Dasypus novemcinctus ENSDNOG00000005159 I 0.704
ZFP36 Danio rerio ENSDARG00000044395 I 0.704
Zfp36l1 Dipodomys ordii ENSDORG00000008348 I 0.704
ZFP36L1 Tursiops truncatus ENSTTRG00000003475 I 0.704
ZFP36L1 Gasterosteus aculeatus ENSGACG00000011271 I 0.704
gw1.42.93.1 Daphnia pulex gw1.42.93.1 N 0.704
ZFP36L1 Tetraodon nigroviridis ENSTNIG00000002277 I 0.704
TISB_RAT Rattus norvegicus ENSRNOG00000030024 I 0.704
Zfp36l3 Mus musculus ENSMUSG00000059334 I 0.704
Ame_R004924 Ailuropoda melanoleuca Ame_R004924 I 0.704
XR_022888.1 Pan troglodytes ENSPTRG00000030712 I 0.704
Zfp36l1 Mus musculus ENSMUSG00000021127 I 0.704
ZFP36L1 Spermophilus tridecemlineatus ENSSTOG00000009758 I 0.704
ZFP36L1 Macropus eugenii ENSMEUG00000003070 I 0.704
zfp36l1a Danio rerio ENSDARG00000016154 I 0.704
ZFP36 Tetraodon nigroviridis ENSTNIG00000000183 I 0.704
ZFP36L1 Taeniopygia guttata ENSTGUG00000011494 I 0.704
ZFP36L1 Loxodonta africana ENSLAFG00000028594 I 0.704
ZFP36L2 Takifugu rubripes ENSTRUG00000006923 I 0.704
ZFP36L1 Cavia porcellus ENSCPOG00000025078 I 0.704
AMAG_15989 Allomyces macrogynus AMAG_15989 N 0.704
AMAG_06814 Allomyces macrogynus AMAG_06814 N 0.704
EIN_295900 Entamoeba invadens EIN_295900 N 0.704
nasonia_NCBI_hmm9264 Nasonia vitripennis nasonia_NCBI_hmm9264 I 0.704
AGAP010954 Anopheles gambiae AGAP010954 N 0.704
Q805B4 Xenopus laevis Q805B4 I 0.704
ZFP36L1 Sus scrofa ENSSSCG00000002302 I 0.704
AAH84221 Xenopus laevis AAH84221 I 0.704
AAH84197 Xenopus laevis AAH84197 I 0.704
AAI00163 Xenopus laevis AAI00163 I 0.704
e_gw1.40.110.1 Trichoplax adhaerens e_gw1.40.110.1 I 0.704
BAC54909 Xenopus laevis BAC54909 I 0.704
DDB_G0285973 Dictyostelium discoideum DDB_G0285973 I 0.704
ENSACAG00000005547 Anolis carolinensis ENSACAG00000005547 I 0.704
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.704
ZFP36L1 Procavia capensis ENSPCAG00000005383 I 0.704
LOC100405281 Callithrix jacchus ENSCJAG00000015116 I 0.704
ZFP36L1 Oryzias latipes ENSORLG00000011106 I 0.704
ZFP36L2 Cavia porcellus ENSCPOG00000022038 I 0.704
ZFP36L1 Canis familiaris ENSCAFG00000016497 I 0.704
ZFP36L2 Procavia capensis ENSPCAG00000010765 I 0.704
zfp36l1 Xenopus tropicalis ENSXETG00000016987 I 0.704
ENSPPYG00000005933 Pongo pygmaeus ENSPPYG00000005933 I 0.704
AAD24208 Xenopus laevis AAD24208 I 0.704
A7MB98_BOVIN Bos taurus ENSBTAG00000025434 I 0.704
ZFP36L1 Pteropus vampyrus ENSPVAG00000011686 I 0.704
AAD24209 Xenopus laevis AAD24209 I 0.704