CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MKRN3
(
Felis catus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSFCAG00000009688
T02618_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000008984
CCCH ZF
31
56
TKQVICRYYLHGLCKEGENCRYSHDL
ENSFCAP00000008984
CCCH ZF
175
199
GQQLCRDAAMGQCFRGESCMYIHGE
ENSFCAP00000008984
CCCH ZF
332
357
NKTCRYFAEGRGYCPFGENCFYKHAT
Links
Other
CCCH ZF
family RBPs
Other
Felis catus
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R014340
Ailuropoda melanoleuca
Ame_R014340
N
0.948
MKRN3
Oryctolagus cuniculus
ENSOCUG00000012822
N
0.846
MKRN3
Tarsius syrichta
ENSTSYG00000009002
N
0.821
MKRN3
Choloepus hoffmanni
ENSCHOG00000004895
N
0.818
MKRN3
Sus scrofa
ENSSSCG00000004836
N
0.769
MKRN3
Procavia capensis
ENSPCAG00000016788
N
0.766
MKRN3
Spermophilus tridecemlineatus
ENSSTOG00000006095
N
0.747
Q6J9M5_PANTR
Pan troglodytes
ENSPTRG00000006823
N
0.740
Q6J9M4_9PRIM
Gorilla gorilla
ENSGGOG00000013279
N
0.740
MKRN3
Homo sapiens
ENSG00000179455
N
0.740
ENSPPYG00000006266
Pongo pygmaeus
ENSPPYG00000006266
N
0.740
MKRN3
Callithrix jacchus
ENSCJAG00000022162
N
0.727
MKRN3
Macaca mulatta
ENSMMUG00000007879
N
0.727