ccch-5 (Caenorhabditis elegans)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Y57G11C.25 T04187_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Y57G11C.25 CCCH ZF 69 95
Y57G11C.25 CCCH ZF 112 138

Links

Other CCCH ZF family RBPs
Other Caenorhabditis elegans RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ccch-2 Caenorhabditis elegans F38C2.5 N 0.944
Y116A8C.19 Caenorhabditis elegans Y116A8C.19 N 0.741
Y116A8C.20 Caenorhabditis elegans Y116A8C.20 N 0.722
C35D6.4 Caenorhabditis elegans C35D6.4 N 0.722
F38C2.7 Caenorhabditis elegans F38C2.7 N 0.722
CBN24850 Caenorhabditis brenneri CBN24850 N 0.722
CBG11249 Caenorhabditis briggsae CBG11249 N 0.722
CBG23753 Caenorhabditis briggsae CBG23753 N 0.722
CBN18470 Caenorhabditis brenneri CBN18470 N 0.722
CJA09680 Caenorhabditis japonica CJA09680 N 0.704
CRE05531 Caenorhabditis remanei CRE05531 N 0.704
pos-1 Caenorhabditis elegans F52E1.1 N 0.704