153596 (Helobdella robusta)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 153596 T04655_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
153596 CCCH ZF 3 29
153596 CCCH ZF 41 67

Links

Other CCCH ZF family RBPs
Other Helobdella robusta RBPs

118 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CPIJ018734 Culex quinquefasciatus CPIJ018734 I 0.778
zgc:114130 Danio rerio ENSDARG00000040725 I 0.778
CpipJ_CPIJ018734 Culex pipiens CpipJ_CPIJ018734 I 0.778
AAEL002308 Aedes aegypti AAEL002308 I 0.778
Zfp36l3 Mus musculus ENSMUSG00000059334 I 0.759
GA17935-RA Drosophila pseudoobscura FBgn0077944 N 0.759
GM11580 Drosophila sechellia FBgn0166523 N 0.759
AGAP010954 Anopheles gambiae AGAP010954 N 0.759
GE17025 Drosophila yakuba FBgn0234511 N 0.759
GF21384 Drosophila ananassae FBgn0098386 N 0.759
Tis11 Drosophila melanogaster FBgn0011837 N 0.759
gw1.534.24.1 Capitella teleta gw1.534.24.1 I 0.759
GL13141 Drosophila persimilis FBgn0150747 N 0.759
GG17735 Drosophila erecta FBgn0109957 N 0.759
BGIBMGA008337 Bombyx mori BGIBMGA008337 I 0.759
ZFP36L1 Oryzias latipes ENSORLG00000011106 I 0.741
ZFP36L1 Oryctolagus cuniculus ENSOCUG00000003168 I 0.741
ZFP36L2 Ornithorhynchus anatinus ENSOANG00000002848 I 0.741
ENSPPYG00000012458 Pongo pygmaeus ENSPPYG00000012458 I 0.741
ZFP36L1 Procavia capensis ENSPCAG00000005383 I 0.741
ENSPPYG00000005933 Pongo pygmaeus ENSPPYG00000005933 I 0.741
ZFP36L2 Pan troglodytes ENSPTRG00000011870 I 0.741
ZFP36L2 Procavia capensis ENSPCAG00000010765 I 0.741
ZFP36L2 Myotis lucifugus ENSMLUG00000015588 I 0.741
ZFP36L1 Macropus eugenii ENSMEUG00000003070 I 0.741
ZFP36L1 Loxodonta africana ENSLAFG00000028594 I 0.741
ZFP36L2 Loxodonta africana ENSLAFG00000004265 I 0.741
Aqu1.221345 Amphimedon queenslandica Aqu1.221345 I 0.741
ZFP36L2 Macropus eugenii ENSMEUG00000010649 I 0.741
ZFP36L2 Microcebus murinus ENSMICG00000010318 I 0.741
Zfp36l1 Mus musculus ENSMUSG00000021127 I 0.741
ZFP36L2 Monodelphis domestica ENSMODG00000000407 I 0.741
XR_022888.1 Pan troglodytes ENSPTRG00000030712 I 0.741
Zfp36l2 Mus musculus ENSMUSG00000045817 I 0.741
GK25600 Drosophila willistoni FBgn0227559 N 0.741
ZFP36L1 Tursiops truncatus ENSTTRG00000003475 I 0.741
ZFP36L1 Tarsius syrichta ENSTSYG00000009284 I 0.741
ZFP36L1 Takifugu rubripes ENSTRUG00000012295 I 0.741
ZFP36 Takifugu rubripes ENSTRUG00000002023 I 0.741
ZFP36L2 Tursiops truncatus ENSTTRG00000006356 I 0.741
zfp36l2 Xenopus tropicalis ENSXETG00000009274 I 0.741
GI21684 Drosophila mojavensis FBgn0144414 N 0.741
GH17894 Drosophila grimshawi FBgn0125362 N 0.741
zfp36l1 Xenopus tropicalis ENSXETG00000016987 I 0.741
ZFP36L1 Taeniopygia guttata ENSTGUG00000011494 I 0.741
ZFP36L2 Tupaia belangeri ENSTBEG00000012370 I 0.741
ZFP36L1 Sus scrofa ENSSSCG00000002302 I 0.741
TISB_RAT Rattus norvegicus ENSRNOG00000030024 I 0.741
Zfp36l2 Rattus norvegicus ENSRNOG00000005067 I 0.741
ZFP36L1 Gasterosteus aculeatus ENSGACG00000011271 I 0.741
ENSSSCG00000008460 Sus scrofa ENSSSCG00000008460 I 0.741
ZFP36L1 Spermophilus tridecemlineatus ENSSTOG00000009758 I 0.741
GJ15863 Drosophila virilis FBgn0203050 N 0.741
ZFP36L2 Sus scrofa ENSSSCG00000008461 I 0.741
ZFP36L1 Pteropus vampyrus ENSPVAG00000011686 I 0.741
ZFP36L2 Gorilla gorilla ENSGGOG00000001402 I 0.741
amel4_ncbi_hmm10964 Apis mellifera amel4_ncbi_hmm10964 I 0.741
Q805B4 Xenopus laevis Q805B4 I 0.741
Q7ZXW9 Xenopus laevis Q7ZXW9 I 0.741
BAC54909 Xenopus laevis BAC54909 I 0.741
ENSACAG00000005547 Anolis carolinensis ENSACAG00000005547 I 0.741
ZFP36L2 Anolis carolinensis ENSACAG00000014740 I 0.741
ZFP36L2 Canis familiaris ENSCAFG00000002438 I 0.741
A7MB98_BOVIN Bos taurus ENSBTAG00000025434 I 0.741
Q1JP65_BOVIN Bos taurus ENSBTAG00000003553 I 0.741
AAI00163 Xenopus laevis AAI00163 I 0.741
AAH84221 Xenopus laevis AAH84221 I 0.741
Ame_R000168 Ailuropoda melanoleuca Ame_R000168 I 0.741
estExt_fgenesh2_pg.C_680108 Branchiostoma floridae estExt_fgenesh2_pg.C_680108 I 0.741
e_gw.346.37.1 Nematostella vectensis e_gw.346.37.1 I 0.741
Ame_R004924 Ailuropoda melanoleuca Ame_R004924 I 0.741
AAD24208 Xenopus laevis AAD24208 I 0.741
AAH84197 Xenopus laevis AAH84197 I 0.741
AAH44086 Xenopus laevis AAH44086 I 0.741
AAD24209 Xenopus laevis AAD24209 I 0.741
ZFP36L1 Canis familiaris ENSCAFG00000016497 I 0.741
nasonia_NCBI_hmm9264 Nasonia vitripennis nasonia_NCBI_hmm9264 I 0.741
ZFP36L1 Homo sapiens ENSG00000185650 I 0.741
ZFP36L1 Dasypus novemcinctus ENSDNOG00000005159 I 0.741
zfp36l1a Danio rerio ENSDARG00000016154 I 0.741
zfp36l1b Danio rerio ENSDARG00000021443 I 0.741
ZFP36L2 Homo sapiens ENSG00000152518 I 0.741
ZFP36 Gasterosteus aculeatus ENSGACG00000008344 I 0.741
ZFP36L1 Cavia porcellus ENSCPOG00000025078 I 0.741
LOC100405281 Callithrix jacchus ENSCJAG00000015116 I 0.741
LOC100386590 Callithrix jacchus ENSCJAG00000014571 I 0.741
ZFP36L2 Cavia porcellus ENSCPOG00000022038 I 0.741
Zfp36l1 Dipodomys ordii ENSDORG00000008348 I 0.741
LOC100063597 Equus caballus ENSECAG00000018860 I 0.741
XP_001178437.1 Strongylocentrotus purpuratus XP_001178437.1 I 0.722
XP_782811.1 Strongylocentrotus purpuratus XP_782811.1 I 0.722
XP_001175810.1 Strongylocentrotus purpuratus XP_001175810.1 I 0.722
gw1.42.93.1 Daphnia pulex gw1.42.93.1 N 0.722
e_gw1.40.110.1 Trichoplax adhaerens e_gw1.40.110.1 I 0.722
ENSGACG00000013400 Gasterosteus aculeatus ENSGACG00000013400 I 0.722
gw1.30.59.1 Lottia gigantea gw1.30.59.1 N 0.722
XP_001175665.1 Strongylocentrotus purpuratus XP_001175665.1 I 0.722
ZFP36L2 Takifugu rubripes ENSTRUG00000006923 I 0.722
Zfp36l3 Rattus norvegicus ENSRNOG00000029788 I 0.722
ZFP36L2 Tetraodon nigroviridis ENSTNIG00000017103 I 0.722
ZFP36L1 Tetraodon nigroviridis ENSTNIG00000002277 I 0.722
zfp36l2 Danio rerio ENSDARG00000021806 I 0.722
ENSCSAVG00000002923 Ciona savignyi ENSCSAVG00000002923 I 0.722
ENSTNIG00000019802 Tetraodon nigroviridis ENSTNIG00000019802 I 0.722
Q4H2G7_CIOIN Ciona intestinalis ENSCING00000014446 I 0.722
CABZ01070258.1 Danio rerio ENSDARG00000040503 I 0.722
ENSTRUG00000003178 Takifugu rubripes ENSTRUG00000003178 I 0.722
ENSORLG00000000589 Oryzias latipes ENSORLG00000000589 I 0.704
ENSORLG00000008378 Oryzias latipes ENSORLG00000008378 I 0.704
EHI_008770 Entamoeba histolytica EHI_008770 N 0.704
138584 Helobdella robusta 138584 N 0.704
EDI_287240 Entamoeba dispar EDI_287240 N 0.704
ZFP36 Tetraodon nigroviridis ENSTNIG00000000183 I 0.704
ZFP36 Macropus eugenii ENSMEUG00000010317 I 0.704
XP_002159721.1 Hydra magnipapillata XP_002159721.1 N 0.704
ZFP36 Danio rerio ENSDARG00000044395 I 0.704
ENSGACG00000008351 Gasterosteus aculeatus ENSGACG00000008351 I 0.704
DDB_G0285973 Dictyostelium discoideum DDB_G0285973 I 0.704