gw1.4.464.1 (Volvox carteri)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 gw1.4.464.1 T05546_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.4.464.1 CCCH ZF 1 28
gw1.4.464.1 CCCH ZF 40 65

Links

Other CCCH ZF family RBPs
Other Volvox carteri RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
au.g10607_t1 Chlamydomonas reinhardtii au.g10607_t1 N 0.836
gw1.14.301.1 Coccomyxa C 169 gw1.14.301.1 N 0.759
gw1.8.374.1 Chlorella NC64A gw1.8.374.1 N 0.745
fgenesh2_pg.C_scaffold_32000041 Selaginella moellendorfii fgenesh2_pg.C_scaffold_32000041 N 0.732
e_gw1.45.79.1 Selaginella moellendorfii e_gw1.45.79.1 N 0.732
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.727
0300010273 Ostreococcus tauri 0300010273 I 0.727
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.714
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.709
gw1.1.1133.1 Micromonas pusilla gw1.1.1133.1 N 0.709