XP_001178544.1 (Strongylocentrotus purpuratus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 XP_001178544.1 T06603_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001178544.1 CCCH ZF 423 449

Links

Other CCCH ZF family RBPs
Other Strongylocentrotus purpuratus RBPs

87 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_001176931.1 Strongylocentrotus purpuratus XP_001176931.1 N 1.000
rc3h1 Danio rerio ENSDARG00000062550 N 0.778
si:dkey-60b12.1 Danio rerio ENSDARG00000063182 N 0.778
ENSTNIG00000015269 Tetraodon nigroviridis ENSTNIG00000015269 N 0.778
gw1.3.272.1 Daphnia pulex gw1.3.272.1 N 0.778
ENSTRUG00000008347 Takifugu rubripes ENSTRUG00000008347 N 0.778
ENSGACG00000013855 Gasterosteus aculeatus ENSGACG00000013855 N 0.778
ENSORLG00000016041 Oryzias latipes ENSORLG00000016041 N 0.778
RC3H1 Pan troglodytes ENSPTRG00000001702 N 0.741
LOC680586 Rattus norvegicus ENSRNOG00000002750 N 0.741
ENSSARG00000004660 Sorex araneus ENSSARG00000004660 N 0.741
Rc3h2 Rattus norvegicus ENSRNOG00000009196 N 0.741
RC3H1 Pteropus vampyrus ENSPVAG00000007593 N 0.741
RC3H2 Pan troglodytes ENSPTRG00000021339 N 0.741
RC3H1 Procavia capensis ENSPCAG00000010775 N 0.741
RC3H1 Oryctolagus cuniculus ENSOCUG00000004930 N 0.741
RC3H2 Ornithorhynchus anatinus ENSOANG00000008194 N 0.741
RC3H1 Ornithorhynchus anatinus ENSOANG00000000924 N 0.741
RC3H2 Oryctolagus cuniculus ENSOCUG00000008804 N 0.741
RC3H2 Otolemur garnettii ENSOGAG00000010678 N 0.741
RC3H2 Sorex araneus ENSSARG00000012329 N 0.741
RC3H1 Ochotona princeps ENSOPRG00000013068 N 0.741
RC3H2 Ochotona princeps ENSOPRG00000000135 N 0.741
ENSPPYG00000000490 Pongo pygmaeus ENSPPYG00000000490 N 0.741
RC3H1 Tupaia belangeri ENSTBEG00000005015 N 0.741
RC3H1 Vicugna pacos ENSVPAG00000002591 N 0.741
RC3H2 Tursiops truncatus ENSTTRG00000016954 N 0.741
RC3H1 Tursiops truncatus ENSTTRG00000008572 N 0.741
RC3H2 Vicugna pacos ENSVPAG00000005994 N 0.741
rc3h1 Xenopus tropicalis ENSXETG00000020030 N 0.741
Ame_R019935 Ailuropoda melanoleuca Ame_R019935 N 0.741
Ame_R004849 Ailuropoda melanoleuca Ame_R004849 N 0.741
ISCW013176 Ixodes scapularis ISCW013176 N 0.741
RC3H1 Tarsius syrichta ENSTSYG00000003913 N 0.741
RC3H2 Tarsius syrichta ENSTSYG00000000961 N 0.741
Rc3h2 Mus musculus ENSMUSG00000075376 N 0.741
RC3H2 Spermophilus tridecemlineatus ENSSTOG00000010655 N 0.741
RC3H1 Sus scrofa ENSSSCG00000015498 N 0.741
RC3H2 Tupaia belangeri ENSTBEG00000009622 N 0.741
RC3H1 Taeniopygia guttata ENSTGUG00000004090 N 0.741
XP_002198236.1 Taeniopygia guttata ENSTGUG00000014803 N 0.741
RC3H2 Taeniopygia guttata ENSTGUG00000006889 N 0.741
RC3H2 Sus scrofa ENSSSCG00000005575 N 0.741
Rc3h1 Mus musculus ENSMUSG00000040423 N 0.741
RC3H2 Cavia porcellus ENSCPOG00000008511 N 0.741
RC3H1 Cavia porcellus ENSCPOG00000004349 N 0.741
RC3H2 Callithrix jacchus ENSCJAG00000020050 N 0.741
RC3H1 Callithrix jacchus ENSCJAG00000009106 N 0.741
RC3H2 Danio rerio ENSDARG00000063050 N 0.741
Rc3h1 Dipodomys ordii ENSDORG00000004855 N 0.741
AAH68669 Xenopus laevis AAH68669 N 0.741
LOC100052499 Equus caballus ENSECAG00000021208 N 0.741
Rc3h2 Dipodomys ordii ENSDORG00000006398 N 0.741
RC3H2 Canis familiaris ENSCAFG00000020250 N 0.741
RC3H1 Canis familiaris ENSCAFG00000014434 N 0.741
DGIL_AUG5s17420g5t1 Acyrtosiphon pisum DGIL_AUG5s17420g5t1 N 0.741
CpipJ_CPIJ008431 Culex pipiens CpipJ_CPIJ008431 N 0.741
Q6NUC6 Xenopus laevis Q6NUC6 N 0.741
AAEL014030 Aedes aegypti AAEL014030 N 0.741
CPIJ008431 Culex quinquefasciatus CPIJ008431 N 0.741
RC3H2 Bos taurus ENSBTAG00000023867 N 0.741
RC3H1 Bos taurus ENSBTAG00000020094 N 0.741
ENSACAG00000015271 Anolis carolinensis ENSACAG00000015271 N 0.741
RC3H1 Erinaceus europaeus ENSEEUG00000014861 N 0.741
RC3H2 Equus caballus ENSECAG00000022176 N 0.741
RC3H1 Myotis lucifugus ENSMLUG00000011127 N 0.741
RC3H1 Microcebus murinus ENSMICG00000003000 N 0.741
RC3H2 Meleagris gallopavo ENSMGAG00000007984 N 0.741
RC3H2 Myotis lucifugus ENSMLUG00000013992 N 0.741
RC3H1 Macaca mulatta ENSMMUG00000000630 N 0.741
RC3H2 Monodelphis domestica ENSMODG00000019725 N 0.741
RC3H1 Monodelphis domestica ENSMODG00000004289 N 0.741
RC3H2 Macaca mulatta ENSMMUG00000021134 N 0.741
RC3H1 Echinops telfairi ENSETEG00000012064 N 0.741
RC3H1 Loxodonta africana ENSLAFG00000004367 N 0.741
RC3H2 Gallus gallus ENSGALG00000001253 N 0.741
RC3H1 Homo sapiens ENSG00000135870 N 0.741
RC3H2 Homo sapiens ENSG00000056586 N 0.741
RC3H2 Loxodonta africana ENSLAFG00000003521 N 0.741
Q5F439_CHICK Gallus gallus ENSGALG00000004587 N 0.741
RC3H1 Gorilla gorilla ENSGGOG00000005735 N 0.741
RC3H2 Gorilla gorilla ENSGGOG00000017062 N 0.741
RC3H2 Gasterosteus aculeatus ENSGACG00000017369 N 0.704
RC3H2 Oryzias latipes ENSORLG00000010018 N 0.704
gw1.780.2.1 Capitella teleta gw1.780.2.1 N 0.704
AGAP007114 Anopheles gambiae AGAP007114 N 0.704
RC3H2 Takifugu rubripes ENSTRUG00000003364 N 0.704