RC3H2 (Danio rerio)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSDARG00000063050 T02464_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000086213 CCCH ZF 411 437

Links

Other CCCH ZF family RBPs
Other Danio rerio RBPs

96 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RC3H2 Gasterosteus aculeatus ENSGACG00000017369 N 0.926
RC3H2 Takifugu rubripes ENSTRUG00000003364 N 0.926
RC3H2 Oryzias latipes ENSORLG00000010018 N 0.926
RC3H2 Ornithorhynchus anatinus ENSOANG00000008194 N 0.889
Rc3h2 Mus musculus ENSMUSG00000075376 N 0.889
RC3H2 Sorex araneus ENSSARG00000012329 N 0.889
RC3H2 Spermophilus tridecemlineatus ENSSTOG00000010655 N 0.889
Rc3h2 Rattus norvegicus ENSRNOG00000009196 N 0.889
RC3H2 Pan troglodytes ENSPTRG00000021339 N 0.889
RC3H2 Otolemur garnettii ENSOGAG00000010678 N 0.889
RC3H2 Ochotona princeps ENSOPRG00000000135 N 0.889
RC3H2 Tupaia belangeri ENSTBEG00000009622 N 0.889
RC3H2 Oryctolagus cuniculus ENSOCUG00000008804 N 0.889
RC3H2 Tetraodon nigroviridis ENSTNIG00000004942 N 0.889
RC3H2 Bos taurus ENSBTAG00000023867 N 0.889
RC3H2 Canis familiaris ENSCAFG00000020250 N 0.889
RC3H2 Callithrix jacchus ENSCJAG00000020050 N 0.889
RC3H2 Cavia porcellus ENSCPOG00000008511 N 0.889
Ame_R019935 Ailuropoda melanoleuca Ame_R019935 N 0.889
RC3H2 Vicugna pacos ENSVPAG00000005994 N 0.889
RC3H2 Monodelphis domestica ENSMODG00000019725 N 0.889
RC3H2 Tarsius syrichta ENSTSYG00000000961 N 0.889
RC3H2 Tursiops truncatus ENSTTRG00000016954 N 0.889
RC3H2 Taeniopygia guttata ENSTGUG00000006889 N 0.889
RC3H2 Sus scrofa ENSSSCG00000005575 N 0.889
RC3H2 Homo sapiens ENSG00000056586 N 0.889
RC3H2 Gallus gallus ENSGALG00000001253 N 0.889
RC3H2 Gorilla gorilla ENSGGOG00000017062 N 0.889
RC3H2 Meleagris gallopavo ENSMGAG00000007984 N 0.889
RC3H2 Equus caballus ENSECAG00000022176 N 0.889
RC3H2 Myotis lucifugus ENSMLUG00000013992 N 0.889
Rc3h2 Dipodomys ordii ENSDORG00000006398 N 0.889
RC3H2 Macaca mulatta ENSMMUG00000021134 N 0.889
RC3H2 Loxodonta africana ENSLAFG00000003521 N 0.889
RC3H1 Echinops telfairi ENSETEG00000012064 N 0.815
RC3H1 Vicugna pacos ENSVPAG00000002591 N 0.815
RC3H1 Tursiops truncatus ENSTTRG00000008572 N 0.815
RC3H1 Monodelphis domestica ENSMODG00000004289 N 0.815
ENSTNIG00000015269 Tetraodon nigroviridis ENSTNIG00000015269 N 0.815
ENSGACG00000013855 Gasterosteus aculeatus ENSGACG00000013855 N 0.815
ENSTRUG00000008347 Takifugu rubripes ENSTRUG00000008347 N 0.815
RC3H1 Homo sapiens ENSG00000135870 N 0.815
rc3h1 Xenopus tropicalis ENSXETG00000020030 N 0.815
Q6NUC6 Xenopus laevis Q6NUC6 N 0.815
RC3H1 Callithrix jacchus ENSCJAG00000009106 N 0.815
RC3H1 Cavia porcellus ENSCPOG00000004349 N 0.815
Rc3h1 Dipodomys ordii ENSDORG00000004855 N 0.815
rc3h1 Danio rerio ENSDARG00000062550 N 0.815
LOC100052499 Equus caballus ENSECAG00000021208 N 0.815
RC3H1 Canis familiaris ENSCAFG00000014434 N 0.815
RC3H1 Erinaceus europaeus ENSEEUG00000014861 N 0.815
AAH68669 Xenopus laevis AAH68669 N 0.815
ENSACAG00000015271 Anolis carolinensis ENSACAG00000015271 N 0.815
RC3H1 Bos taurus ENSBTAG00000020094 N 0.815
Ame_R004849 Ailuropoda melanoleuca Ame_R004849 N 0.815
RC3H1 Tarsius syrichta ENSTSYG00000003913 N 0.815
ENSORLG00000016041 Oryzias latipes ENSORLG00000016041 N 0.815
RC3H1 Ochotona princeps ENSOPRG00000013068 N 0.815
RC3H1 Microcebus murinus ENSMICG00000003000 N 0.815
RC3H1 Myotis lucifugus ENSMLUG00000011127 N 0.815
XP_002198236.1 Taeniopygia guttata ENSTGUG00000014803 N 0.815
RC3H1 Procavia capensis ENSPCAG00000010775 N 0.815
RC3H2 Macropus eugenii ENSMEUG00000001299 N 0.815
RC3H1 Pteropus vampyrus ENSPVAG00000007593 N 0.815
RC3H1 Pan troglodytes ENSPTRG00000001702 N 0.815
ENSPPYG00000000490 Pongo pygmaeus ENSPPYG00000000490 N 0.815
RC3H1 Oryctolagus cuniculus ENSOCUG00000004930 N 0.815
RC3H1 Macaca mulatta ENSMMUG00000000630 N 0.815
si:dkey-60b12.1 Danio rerio ENSDARG00000063182 N 0.815
RC3H1 Sus scrofa ENSSSCG00000015498 N 0.815
RC3H1 Tupaia belangeri ENSTBEG00000005015 N 0.815
RC3H1 Gorilla gorilla ENSGGOG00000005735 N 0.815
Q5F439_CHICK Gallus gallus ENSGALG00000004587 N 0.815
ENSSARG00000004660 Sorex araneus ENSSARG00000004660 N 0.815
RC3H1 Ornithorhynchus anatinus ENSOANG00000000924 N 0.815
Rc3h1 Mus musculus ENSMUSG00000040423 N 0.815
LOC680586 Rattus norvegicus ENSRNOG00000002750 N 0.815
RC3H1 Loxodonta africana ENSLAFG00000004367 N 0.815
RC3H1 Taeniopygia guttata ENSTGUG00000004090 N 0.815
RC3H2 Procavia capensis ENSPCAG00000010154 N 0.778
XP_001176931.1 Strongylocentrotus purpuratus XP_001176931.1 N 0.741
XP_001178544.1 Strongylocentrotus purpuratus XP_001178544.1 N 0.741
ISCW013176 Ixodes scapularis ISCW013176 N 0.741
gw1.3.272.1 Daphnia pulex gw1.3.272.1 N 0.741
fgenesh2_pg.scaffold_20000167 Branchiostoma floridae fgenesh2_pg.scaffold_20000167 N 0.714
GH15595 Drosophila grimshawi FBgn0123066 N 0.704
GG13458 Drosophila erecta FBgn0105730 N 0.704
GA14160-RA Drosophila pseudoobscura FBgn0074189 N 0.704
GI16872 Drosophila mojavensis FBgn0139618 N 0.704
GF24386 Drosophila ananassae FBgn0101380 N 0.704
GJ12622 Drosophila virilis FBgn0199859 N 0.704
PHUM537030 Pediculus humanus PHUM537030 N 0.704
GE22905 Drosophila yakuba FBgn0240107 N 0.704
GK20807 Drosophila willistoni FBgn0222803 N 0.704
gw1.780.2.1 Capitella teleta gw1.780.2.1 N 0.704
GL18000 Drosophila persimilis FBgn0155603 N 0.704