RC3H2 (Takifugu rubripes)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTRUG00000003364 T03521_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000007864 CCCH ZF 411 437
ENSTRUP00000007865 CCCH ZF 411 437
ENSTRUP00000007866 CCCH ZF 416 442

Links

Other CCCH ZF family RBPs
Other Takifugu rubripes RBPs

88 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RC3H2 Oryzias latipes ENSORLG00000010018 N 0.963
RC3H2 Gasterosteus aculeatus ENSGACG00000017369 N 0.963
RC3H2 Pan troglodytes ENSPTRG00000021339 N 0.926
RC3H2 Canis familiaris ENSCAFG00000020250 N 0.926
RC3H2 Bos taurus ENSBTAG00000023867 N 0.926
RC3H2 Gallus gallus ENSGALG00000001253 N 0.926
RC3H2 Loxodonta africana ENSLAFG00000003521 N 0.926
Rc3h2 Rattus norvegicus ENSRNOG00000009196 N 0.926
RC3H2 Ornithorhynchus anatinus ENSOANG00000008194 N 0.926
RC3H2 Monodelphis domestica ENSMODG00000019725 N 0.926
RC3H2 Equus caballus ENSECAG00000022176 N 0.926
Rc3h2 Dipodomys ordii ENSDORG00000006398 N 0.926
RC3H2 Danio rerio ENSDARG00000063050 N 0.926
RC3H2 Gorilla gorilla ENSGGOG00000017062 N 0.926
RC3H2 Meleagris gallopavo ENSMGAG00000007984 N 0.926
RC3H2 Cavia porcellus ENSCPOG00000008511 N 0.926
RC3H2 Callithrix jacchus ENSCJAG00000020050 N 0.926
RC3H2 Sus scrofa ENSSSCG00000005575 N 0.926
RC3H2 Taeniopygia guttata ENSTGUG00000006889 N 0.926
RC3H2 Vicugna pacos ENSVPAG00000005994 N 0.926
RC3H2 Tursiops truncatus ENSTTRG00000016954 N 0.926
RC3H2 Oryctolagus cuniculus ENSOCUG00000008804 N 0.926
RC3H2 Macaca mulatta ENSMMUG00000021134 N 0.926
RC3H2 Tarsius syrichta ENSTSYG00000000961 N 0.926
RC3H2 Myotis lucifugus ENSMLUG00000013992 N 0.926
RC3H2 Tupaia belangeri ENSTBEG00000009622 N 0.926
RC3H2 Ochotona princeps ENSOPRG00000000135 N 0.926
Ame_R019935 Ailuropoda melanoleuca Ame_R019935 N 0.926
RC3H2 Homo sapiens ENSG00000056586 N 0.926
RC3H2 Spermophilus tridecemlineatus ENSSTOG00000010655 N 0.926
Rc3h2 Mus musculus ENSMUSG00000075376 N 0.926
RC3H2 Otolemur garnettii ENSOGAG00000010678 N 0.926
RC3H2 Sorex araneus ENSSARG00000012329 N 0.926
RC3H2 Macropus eugenii ENSMEUG00000001299 N 0.852
RC3H2 Tetraodon nigroviridis ENSTNIG00000004942 N 0.852
RC3H2 Procavia capensis ENSPCAG00000010154 N 0.815
gw1.780.2.1 Capitella teleta gw1.780.2.1 N 0.778
fgenesh2_pg.scaffold_20000167 Branchiostoma floridae fgenesh2_pg.scaffold_20000167 N 0.750
RC3H1 Ornithorhynchus anatinus ENSOANG00000000924 N 0.741
Rc3h1 Mus musculus ENSMUSG00000040423 N 0.741
RC3H1 Oryctolagus cuniculus ENSOCUG00000004930 N 0.741
ENSPPYG00000000490 Pongo pygmaeus ENSPPYG00000000490 N 0.741
RC3H1 Tupaia belangeri ENSTBEG00000005015 N 0.741
RC3H1 Sus scrofa ENSSSCG00000015498 N 0.741
RC3H1 Taeniopygia guttata ENSTGUG00000004090 N 0.741
XP_002198236.1 Taeniopygia guttata ENSTGUG00000014803 N 0.741
ENSTNIG00000015269 Tetraodon nigroviridis ENSTNIG00000015269 N 0.741
ENSSARG00000004660 Sorex araneus ENSSARG00000004660 N 0.741
LOC680586 Rattus norvegicus ENSRNOG00000002750 N 0.741
ENSORLG00000016041 Oryzias latipes ENSORLG00000016041 N 0.741
RC3H1 Procavia capensis ENSPCAG00000010775 N 0.741
RC3H1 Pan troglodytes ENSPTRG00000001702 N 0.741
RC3H1 Pteropus vampyrus ENSPVAG00000007593 N 0.741
RC3H1 Ochotona princeps ENSOPRG00000013068 N 0.741
Q5F439_CHICK Gallus gallus ENSGALG00000004587 N 0.741
AAH68669 Xenopus laevis AAH68669 N 0.741
Ame_R004849 Ailuropoda melanoleuca Ame_R004849 N 0.741
Q6NUC6 Xenopus laevis Q6NUC6 N 0.741
ENSACAG00000015271 Anolis carolinensis ENSACAG00000015271 N 0.741
RC3H1 Canis familiaris ENSCAFG00000014434 N 0.741
RC3H1 Bos taurus ENSBTAG00000020094 N 0.741
gw1.3.272.1 Daphnia pulex gw1.3.272.1 N 0.741
ISCW013176 Ixodes scapularis ISCW013176 N 0.741
RC3H1 Tarsius syrichta ENSTSYG00000003913 N 0.741
ENSTRUG00000008347 Takifugu rubripes ENSTRUG00000008347 N 0.741
RC3H1 Tursiops truncatus ENSTTRG00000008572 N 0.741
RC3H1 Vicugna pacos ENSVPAG00000002591 N 0.741
rc3h1 Xenopus tropicalis ENSXETG00000020030 N 0.741
RC3H1 Monodelphis domestica ENSMODG00000004289 N 0.741
RC3H1 Callithrix jacchus ENSCJAG00000009106 N 0.741
RC3H1 Gorilla gorilla ENSGGOG00000005735 N 0.741
ENSGACG00000013855 Gasterosteus aculeatus ENSGACG00000013855 N 0.741
RC3H1 Homo sapiens ENSG00000135870 N 0.741
RC3H1 Loxodonta africana ENSLAFG00000004367 N 0.741
RC3H1 Microcebus murinus ENSMICG00000003000 N 0.741
RC3H1 Macaca mulatta ENSMMUG00000000630 N 0.741
RC3H1 Myotis lucifugus ENSMLUG00000011127 N 0.741
RC3H1 Cavia porcellus ENSCPOG00000004349 N 0.741
RC3H1 Echinops telfairi ENSETEG00000012064 N 0.741
Rc3h1 Dipodomys ordii ENSDORG00000004855 N 0.741
si:dkey-60b12.1 Danio rerio ENSDARG00000063182 N 0.741
rc3h1 Danio rerio ENSDARG00000062550 N 0.741
LOC100052499 Equus caballus ENSECAG00000021208 N 0.741
RC3H1 Erinaceus europaeus ENSEEUG00000014861 N 0.741
PHUM537030 Pediculus humanus PHUM537030 N 0.704
XP_001178544.1 Strongylocentrotus purpuratus XP_001178544.1 N 0.704
XP_001176931.1 Strongylocentrotus purpuratus XP_001176931.1 N 0.704