XP_002155288.1 (Hydra magnipapillata)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 XP_002155288.1 T06629_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_002155288.1 CCCH ZF 286 310
XP_002155288.1 CCCH ZF 333 351
XP_002155288.1 CCCH ZF 474 500

Links

Other CCCH ZF family RBPs
Other Hydra magnipapillata RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw.10.245.1 Nematostella vectensis e_gw.10.245.1 N 0.803
fgenesh2_pg.scaffold_5000153 Branchiostoma floridae fgenesh2_pg.scaffold_5000153 N 0.761
XR_022366.1 Pan troglodytes ENSPTRG00000007591 N 0.761
XP_001180099.1 Strongylocentrotus purpuratus XP_001180099.1 N 0.746
XP_789013.2 Strongylocentrotus purpuratus XP_789013.2 N 0.746
ENSCSAVG00000004843 Ciona savignyi ENSCSAVG00000004843 N 0.732
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.732
UNK Oryzias latipes ENSORLG00000018637 N 0.718
UNK Microcebus murinus ENSMICG00000007591 N 0.718
GK12832 Drosophila willistoni FBgn0214841 N 0.704