GSVIVG00033666001 (Vitis vinifera)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		GSVIVG00033666001 T07388_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00033666001 RRM 9 79
GSVIVT00033666001 CCHC ZF 120 137

Links

Other CCHC ZF,RRM family RBPs
Other Vitis vinifera RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma20g24730.1 Glycine max Glyma20g24730.1 N 0.798
Glyma10g42320.1 Glycine max Glyma10g42320.1 N 0.798
cassava30312.valid.m1 Manihot esculenta cassava30312.valid.m1 N 0.798
cassava30311.valid.m1 Manihot esculenta cassava30311.valid.m1 N 0.798
MDP0000088428 Malus x domestica MDP0000088428 N 0.787
mgf007889m Mimulus guttatus mgf007889m N 0.787
Cucsa.317370 Cucumis sativus Cucsa.317370 N 0.787
MDP0000272138 Malus x domestica MDP0000272138 N 0.775
ppa009799m Prunus persica ppa009799m N 0.775
28462.m000127 Ricinus communis 28462.m000127 N 0.764
XM_002871038.1 Arabidopsis lyrata fgenesh2_kg.6__343__AT5G04280.1 N 0.719
BRADI1G55020 Brachypodium distachyon BRADI1G55020 N 0.708
AT1G60650 Arabidopsis thaliana AT1G60650-TAIR-G N 0.708
Cucsa.308610 Cucumis sativus Cucsa.308610 N 0.708
AT5G04280 Arabidopsis thaliana AT5G04280-TAIR-G N 0.708