estExt_gwp.C_1220057 (Nematostella vectensis)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		estExt_gwp.C_1220057 T07551_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6 		Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		0.708
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp.C_1220057 RRM 12 82
estExt_gwp.C_1220057 CCHC ZF 105 122

Links

Other CCHC ZF,RRM family RBPs
Other Nematostella vectensis RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZCRB1 Tetraodon nigroviridis ENSTNIG00000018504 I 0.730
ENSMODG00000008893 Monodelphis domestica ENSMODG00000008893 I 0.719
ENSPPYG00000004422 Pongo pygmaeus ENSPPYG00000004422 I 0.708
ZCRB1 Oryzias latipes ENSORLG00000013088 I 0.708
ZCRB1 Pan troglodytes ENSPTRG00000004838 I 0.708
XM_001371517.1 Monodelphis domestica ENSMODG00000006493 I 0.708
ZCRB1 Vicugna pacos ENSVPAG00000012040 I 0.708
ZCRB1 Takifugu rubripes ENSTRUG00000016764 I 0.708
e_gw1.93.90.1 Lottia gigantea e_gw1.93.90.1 I 0.708
ZCRB1 Loxodonta africana ENSLAFG00000008847 I 0.708
LOC100410115 Callithrix jacchus ENSCJAG00000017749 I 0.708
ZCRB1_BOVIN Bos taurus ENSBTAG00000019119 I 0.708
ZCRB1 Anolis carolinensis ENSACAG00000003172 I 0.708
ZCRB1 Cavia porcellus ENSCPOG00000014554 I 0.708
LOC100049989 Equus caballus ENSECAG00000012174 I 0.708
ZCRB1 Gorilla gorilla ENSGGOG00000015647 I 0.708
ZCRB1 Homo sapiens ENSG00000139168 D 0.708
Ame_R009995 Ailuropoda melanoleuca Ame_R009995 I 0.708