SS1G_14025 (Sclerotinia sclerotiorum)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 SS1G_14025 T08711_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_14025 CCHC ZF 253 270

Links

Other CCHC ZF family RBPs
Other Sclerotinia sclerotiorum RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SS1G_04258 Sclerotinia sclerotiorum SS1G_04258 N 1.000
SS1G_14517 Sclerotinia sclerotiorum SS1G_14517 N 1.000
SS1G_05465 Sclerotinia sclerotiorum SS1G_05465 N 1.000
SS1G_03724 Sclerotinia sclerotiorum SS1G_03724 N 1.000
SS1G_09531 Sclerotinia sclerotiorum SS1G_09531 N 1.000
SS1G_06437 Sclerotinia sclerotiorum SS1G_06437 N 1.000
BC1G_08572 Botrytis cinerea BC1G_08572 N 0.833
BC1G_09043 Botrytis cinerea BC1G_09043 N 0.833
BC1G_07532 Botrytis cinerea BC1G_07532 N 0.833
BC1G_06254 Botrytis cinerea BC1G_06254 N 0.833
BC1G_09712 Botrytis cinerea BC1G_09712 N 0.833
BC1G_04890 Botrytis cinerea BC1G_04890 N 0.833
BC1G_15972 Botrytis cinerea BC1G_15972 N 0.833
BC1G_16215 Botrytis cinerea BC1G_16215 N 0.833
BC1G_16168 Botrytis cinerea BC1G_16168 N 0.833
BC1G_15283 Botrytis cinerea BC1G_15283 N 0.833
BC1G_13225 Botrytis cinerea BC1G_13225 N 0.833
BC1G_12842 Botrytis cinerea BC1G_12842 N 0.833
BC1G_04408 Botrytis cinerea BC1G_04408 N 0.833
BC1G_15284 Botrytis cinerea BC1G_15284 N 0.778
fgenesh1_pg.C_scaffold_20000020 Phytophthora ramorum fgenesh1_pg.C_scaffold_20000020 N 0.778
fgenesh1_pg.C_scaffold_6000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_6000001 N 0.778
fgenesh1_pg.C_scaffold_2102000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2102000001 N 0.778
fgenesh1_pg.C_scaffold_17000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_17000001 N 0.778
BC1G_16148 Botrytis cinerea BC1G_16148 N 0.778
fgenesh1_pg.C_scaffold_1242000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1242000001 N 0.778
fgenesh1_pg.C_scaffold_1347000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1347000001 N 0.778
fgenesh1_pg.C_scaffold_135000007 Phytophthora ramorum fgenesh1_pg.C_scaffold_135000007 N 0.778
fgenesh1_pg.C_scaffold_1590000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1590000001 N 0.778
fgenesh1_pg.C_scaffold_23000077 Phytophthora ramorum fgenesh1_pg.C_scaffold_23000077 N 0.778
fgenesh1_pg.C_scaffold_2072000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_2072000002 N 0.778
fgenesh1_pg.C_scaffold_2342000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2342000001 N 0.778
fgenesh1_pg.C_scaffold_911000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_911000002 N 0.778
fgenesh1_pg.C_scaffold_315000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_315000002 N 0.778
fgenesh1_pg.C_scaffold_2352000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2352000001 N 0.778
BC1G_08449 Botrytis cinerea BC1G_08449 N 0.778
LOC_Os03g22100 Oryza sativa LOC_Os03g22100 N 0.722
fgenesh1_pg.C_scaffold_737000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_737000002 N 0.722
LOC_Os02g33340 Oryza sativa LOC_Os02g33340 N 0.722
DGIL_AUG5s9216g3t1 Acyrtosiphon pisum DGIL_AUG5s9216g3t1 N 0.722
CPSG_00634 Coccidioides posadasii CPSG_00634 N 0.722
SS1G_05620 Sclerotinia sclerotiorum SS1G_05620 N 0.722
fgenesh1_pg.C_scaffold_937000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_937000002 N 0.722
fgenesh1_pg.C_scaffold_49000015 Phytophthora ramorum fgenesh1_pg.C_scaffold_49000015 N 0.722
fgenesh1_pg.C_scaffold_32000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_32000002 N 0.722
fgenesh1_pg.C_scaffold_58000098 Phytophthora ramorum fgenesh1_pg.C_scaffold_58000098 N 0.722
Minc07977 Meloidogyne incognita Minc07977 N 0.722
CHGG_00235 Chaetomium globosum CHGG_00235 N 0.722
CHGG_06816 Chaetomium globosum CHGG_06816 N 0.722