CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ANIA_02865
(
Aspergillus nidulans
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CADANIAG00010225
T09555_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANIAP00010225
CCHC ZF
311
328
RRCFNCGKKGHFARDCTA
Links
Other
CCHC ZF
family RBPs
Other
Aspergillus nidulans
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgenesh3_pg.C_50128
Chlorella NC64A
estExt_fgenesh3_pg.C_50128
N
0.778
ANIA_08557
Aspergillus nidulans
CADANIAG00003050
N
0.722
Minc12116
Meloidogyne incognita
Minc12116
N
0.722
EuGene.0000020314
Micromonas pusilla
EuGene.0000020314
N
0.722
LOC_Os11g35630
Oryza sativa
LOC_Os11g35630
N
0.722
s_450977
Phytophthora sojae
s_450977
N
0.722