CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CJA26989
(
Caenorhabditis japonica
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CJA26989
T09787_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA26989
CCHC ZF
104
121
DQCFRCGCVGHVVRQCTS
Links
Other
CCHC ZF
family RBPs
Other
Caenorhabditis japonica
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CJA23793
Caenorhabditis japonica
CJA23793
N
0.944
CJA21786
Caenorhabditis japonica
CJA21786
N
0.944
CJA23880
Caenorhabditis japonica
CJA23880
N
0.944
CJA12763
Caenorhabditis japonica
CJA12763
N
0.944
CJA17448
Caenorhabditis japonica
CJA17448
N
0.889
CJA27741
Caenorhabditis japonica
CJA27741
N
0.889
CJA22105
Caenorhabditis japonica
CJA22105
N
0.889
CJA25140
Caenorhabditis japonica
CJA25140
N
0.889
CJA18651
Caenorhabditis japonica
CJA18651
N
0.889
CJA21076
Caenorhabditis japonica
CJA21076
N
0.889
CJA19647
Caenorhabditis japonica
CJA19647
N
0.889
CJA23027
Caenorhabditis japonica
CJA23027
N
0.889
CJA13245
Caenorhabditis japonica
CJA13245
N
0.889
CJA24356
Caenorhabditis japonica
CJA24356
N
0.889
CJA05814
Caenorhabditis japonica
CJA05814
N
0.889
CJA03777
Caenorhabditis japonica
CJA03777
N
0.889
CJA00142
Caenorhabditis japonica
CJA00142
N
0.889
CJA24410
Caenorhabditis japonica
CJA24410
N
0.889
CJA02546
Caenorhabditis japonica
CJA02546
N
0.889
CJA23492
Caenorhabditis japonica
CJA23492
N
0.889
CJA21290
Caenorhabditis japonica
CJA21290
N
0.833
CJA17240
Caenorhabditis japonica
CJA17240
N
0.833
CJA18092
Caenorhabditis japonica
CJA18092
N
0.833
CJA28132
Caenorhabditis japonica
CJA28132
N
0.833
CJA13138
Caenorhabditis japonica
CJA13138
N
0.833
CJA10256
Caenorhabditis japonica
CJA10256
N
0.833
CJA29053
Caenorhabditis japonica
CJA29053
N
0.778
CJA15447
Caenorhabditis japonica
CJA15447
N
0.722
CJA26146
Caenorhabditis japonica
CJA26146
N
0.722
CJA05850
Caenorhabditis japonica
CJA05850
N
0.722
CJA07934
Caenorhabditis japonica
CJA07934
N
0.722
CJA13676
Caenorhabditis japonica
CJA13676
N
0.722