CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC9
(
Macropus eugenii
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSMEUG00000011005
T10253_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000010038
CCHC ZF
123
140
QVCYHCRKQGHGVADCPA
ENSMEUP00000010038
CCHC ZF
150
166
GICYRCGSTEHEITTCR
ENSMEUP00000010038
CCHC ZF
179
196
AKCFICGEMGHLSRSCPD
ENSMEUP00000010038
CCHC ZF
206
223
GGCRLCGSVEHFKKDCPE
Links
Other
CCHC ZF
family RBPs
Other
Macropus eugenii
RBPs
43 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XM_001363259.1
Monodelphis domestica
ENSMODG00000020261
N
0.944
Zcchc9
Dipodomys ordii
ENSDORG00000001300
N
0.903
ZCCHC9
Tarsius syrichta
ENSTSYG00000012423
N
0.889
Ame_R004078
Ailuropoda melanoleuca
Ame_R004078
N
0.889
ZCCHC9
Ornithorhynchus anatinus
ENSOANG00000014769
N
0.889
ZCCHC9
Loxodonta africana
ENSLAFG00000012763
N
0.875
XM_854231.1
Canis familiaris
ENSCAFG00000008703
N
0.875
ZCCHC9
Choloepus hoffmanni
ENSCHOG00000005268
N
0.875
ZCCHC9
Sorex araneus
ENSSARG00000008580
N
0.875
ZCCHC9
Gorilla gorilla
ENSGGOG00000013790
N
0.861
A6H756_BOVIN
Bos taurus
ENSBTAG00000005265
N
0.861
ZCCHC9
Homo sapiens
ENSG00000131732
N
0.861
LOC100073252
Equus caballus
ENSECAG00000023186
N
0.861
ZCCHC9
Dasypus novemcinctus
ENSDNOG00000016708
N
0.861
ZCCHC9
Vicugna pacos
ENSVPAG00000009423
N
0.861
Zcchc9
Rattus norvegicus
ENSRNOG00000014927
N
0.861
ZCCHC9
Pan troglodytes
ENSPTRG00000017047
N
0.861
Q3YAK8_MACMU
Macaca mulatta
ENSMMUG00000020655
N
0.861
ZCCHC9
Microcebus murinus
ENSMICG00000016266
N
0.861
ENSPPYG00000015604
Pongo pygmaeus
ENSPPYG00000015604
N
0.861
ZCCHC9
Sus scrofa
ENSSSCG00000014129
N
0.859
LOC100395171
Callithrix jacchus
ENSCJAG00000019486
N
0.847
ZCCHC9
Oryctolagus cuniculus
ENSOCUG00000011215
N
0.847
ZCCHC9
Erinaceus europaeus
ENSEEUG00000010726
N
0.847
ZCCHC9
Otolemur garnettii
ENSOGAG00000002543
N
0.847
ZCCHC9
Cavia porcellus
ENSCPOG00000003947
N
0.847
XM_847464.1
Canis familiaris
ENSCAFG00000023419
N
0.847
ZCCHC9
Tursiops truncatus
ENSTTRG00000013796
N
0.847
ZCCHC9
Anolis carolinensis
ENSACAG00000010965
N
0.847
ZCCHC9
Taeniopygia guttata
ENSTGUG00000006994
N
0.845
ZCCHC9
Myotis lucifugus
ENSMLUG00000001886
N
0.833
ZCCHC9
Meleagris gallopavo
ENSMGAG00000006841
N
0.831
Zcchc9
Mus musculus
ENSMUSG00000021621
N
0.819
ZCCHC9
Gallus gallus
ENSGALG00000015603
N
0.817
ZCCHC9
Oryzias latipes
ENSORLG00000020135
N
0.806
ZCCHC9
Tetraodon nigroviridis
ENSTNIG00000013571
N
0.803
zcchc9
Xenopus tropicalis
ENSXETG00000027804
N
0.789
AAH68817
Xenopus laevis
AAH68817
N
0.778
ZCCHC9
Takifugu rubripes
ENSTRUG00000018600
N
0.775
ZCCHC9
Ochotona princeps
ENSOPRG00000004474
N
0.746
ZCCHC9
Gasterosteus aculeatus
ENSGACG00000015540
N
0.732
zcchc9
Danio rerio
ENSDARG00000007531
N
0.718
ENSCING00000008173
Ciona intestinalis
ENSCING00000008173
N
0.704