zcchc9 (Xenopus tropicalis)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSXETG00000027804 T10611_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000057849 CCHC ZF 104 121
ENSXETP00000057849 CCHC ZF 131 147
ENSXETP00000057849 CCHC ZF 160 177
ENSXETP00000057849 CCHC ZF 187 204

Links

Other CCHC ZF family RBPs
Other Xenopus tropicalis RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH68817 Xenopus laevis AAH68817 N 0.917
ZCCHC9 Anolis carolinensis ENSACAG00000010965 N 0.861
ZCCHC9 Oryzias latipes ENSORLG00000020135 N 0.819
ZCCHC9 Ornithorhynchus anatinus ENSOANG00000014769 N 0.819
Ame_R004078 Ailuropoda melanoleuca Ame_R004078 N 0.819
ZCCHC9 Tetraodon nigroviridis ENSTNIG00000013571 N 0.817
LOC100073252 Equus caballus ENSECAG00000023186 N 0.806
XM_854231.1 Canis familiaris ENSCAFG00000008703 N 0.806
ZCCHC9 Choloepus hoffmanni ENSCHOG00000005268 N 0.806
Zcchc9 Dipodomys ordii ENSDORG00000001300 N 0.806
ZCCHC9 Loxodonta africana ENSLAFG00000012763 N 0.792
ZCCHC9 Tursiops truncatus ENSTTRG00000013796 N 0.792
Zcchc9 Rattus norvegicus ENSRNOG00000014927 N 0.792
ZCCHC9 Erinaceus europaeus ENSEEUG00000010726 N 0.792
ZCCHC9 Vicugna pacos ENSVPAG00000009423 N 0.792
ZCCHC9 Tarsius syrichta ENSTSYG00000012423 N 0.792
ZCCHC9 Dasypus novemcinctus ENSDNOG00000016708 N 0.792
ZCCHC9 Sus scrofa ENSSSCG00000014129 N 0.789
ZCCHC9 Takifugu rubripes ENSTRUG00000018600 N 0.789
ZCCHC9 Macropus eugenii ENSMEUG00000011005 N 0.789
ENSPPYG00000015604 Pongo pygmaeus ENSPPYG00000015604 N 0.778
ZCCHC9 Gorilla gorilla ENSGGOG00000013790 N 0.778
ZCCHC9 Pan troglodytes ENSPTRG00000017047 N 0.778
ZCCHC9 Homo sapiens ENSG00000131732 N 0.778
ZCCHC9 Sorex araneus ENSSARG00000008580 N 0.778
ZCCHC9 Cavia porcellus ENSCPOG00000003947 N 0.778
A6H756_BOVIN Bos taurus ENSBTAG00000005265 N 0.778
ZCCHC9 Myotis lucifugus ENSMLUG00000001886 N 0.778
ZCCHC9 Microcebus murinus ENSMICG00000016266 N 0.778
Q3YAK8_MACMU Macaca mulatta ENSMMUG00000020655 N 0.778
XM_001363259.1 Monodelphis domestica ENSMODG00000020261 N 0.778
XM_847464.1 Canis familiaris ENSCAFG00000023419 N 0.778
Zcchc9 Mus musculus ENSMUSG00000021621 N 0.778
LOC100395171 Callithrix jacchus ENSCJAG00000019486 N 0.764
ZCCHC9 Oryctolagus cuniculus ENSOCUG00000011215 N 0.764
ZCCHC9 Otolemur garnettii ENSOGAG00000002543 N 0.764
ZCCHC9 Gasterosteus aculeatus ENSGACG00000015540 N 0.761
ZCCHC9 Gallus gallus ENSGALG00000015603 N 0.746
zcchc9 Danio rerio ENSDARG00000007531 N 0.746
ZCCHC9 Taeniopygia guttata ENSTGUG00000006994 N 0.746
ZCCHC9 Meleagris gallopavo ENSMGAG00000006841 N 0.732