CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSMODG00000011014
(
Monodelphis domestica
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSMODG00000011014
T10312_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000013793
CCHC ZF
398
415
ESCFRCGGAGHWASQCPG
ENSMODP00000032954
CCHC ZF
420
437
ESCFRCGGAGHWASQCPG
Links
Other
CCHC ZF
family RBPs
Other
Monodelphis domestica
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMEUG00000001818
Macropus eugenii
ENSMEUG00000001818
N
0.944
AAY89585
Xenopus laevis
AAY89585
N
0.833
BAE48358
Xenopus laevis
BAE48358
N
0.833
recql4
Xenopus tropicalis
ENSXETG00000016582
N
0.833
AAI61707
Xenopus laevis
AAI61707
N
0.833
ENSMLUG00000011295
Myotis lucifugus
ENSMLUG00000011295
N
0.778
ENSPVAG00000006784
Pteropus vampyrus
ENSPVAG00000006784
N
0.778
ENSSSCG00000005884
Sus scrofa
ENSSSCG00000005884
N
0.778
ENSSSCG00000005898
Sus scrofa
ENSSSCG00000005898
N
0.778
ENSOPRG00000002588
Ochotona princeps
ENSOPRG00000002588
N
0.722
ENSLAFG00000009512
Loxodonta africana
ENSLAFG00000009512
N
0.722
ENSACAG00000010589
Anolis carolinensis
ENSACAG00000010589
N
0.722
ENSTSYG00000012090
Tarsius syrichta
ENSTSYG00000012090
N
0.722
ENSCAFG00000001569
Canis familiaris
ENSCAFG00000001569
N
0.722
ENSDNOG00000002674
Dasypus novemcinctus
ENSDNOG00000002674
N
0.722