CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSACAG00000010589
(
Anolis carolinensis
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSACAG00000010589
T09959_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000010438
CCHC ZF
50
67
DTCFRCGEVGHWASQCKG
Links
Other
CCHC ZF
family RBPs
Other
Anolis carolinensis
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAI61707
Xenopus laevis
AAI61707
N
0.833
AAY89585
Xenopus laevis
AAY89585
N
0.833
BAE48358
Xenopus laevis
BAE48358
N
0.833
recql4
Xenopus tropicalis
ENSXETG00000016582
N
0.833
Recql4
Rattus norvegicus
ENSRNOG00000032446
N
0.778
Recql4
Mus musculus
ENSMUSG00000033762
N
0.778
ENSMODG00000011014
Monodelphis domestica
ENSMODG00000011014
N
0.722
ENSMLUG00000011295
Myotis lucifugus
ENSMLUG00000011295
N
0.722
ENSMEUG00000001818
Macropus eugenii
ENSMEUG00000001818
N
0.722
ENSTRUG00000012749
Takifugu rubripes
ENSTRUG00000012749
N
0.722
ENSSSCG00000005898
Sus scrofa
ENSSSCG00000005898
N
0.722
ENSPVAG00000006784
Pteropus vampyrus
ENSPVAG00000006784
N
0.722
ENSCING00000008935
Ciona intestinalis
ENSCING00000008935
N
0.722
ENSSSCG00000005884
Sus scrofa
ENSSSCG00000005884
N
0.722
ENSOANG00000003526
Ornithorhynchus anatinus
ENSOANG00000003526
N
0.722