CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Recql4
(
Mus musculus
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSMUSG00000033762
T10328_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000044363
CCHC ZF
393
410
DTCFRCGQFGHWASQCSQ
ENSMUSP00000105422
CCHC ZF
393
410
DTCFRCGQFGHWASQCSQ
Links
Other
CCHC ZF
family RBPs
Other
Mus musculus
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Recql4
Rattus norvegicus
ENSRNOG00000032446
N
1.000
ENSSSCG00000005898
Sus scrofa
ENSSSCG00000005898
N
0.833
ENSSSCG00000005884
Sus scrofa
ENSSSCG00000005884
N
0.833
ENSPVAG00000006784
Pteropus vampyrus
ENSPVAG00000006784
N
0.833
ENSMLUG00000011295
Myotis lucifugus
ENSMLUG00000011295
N
0.778
ENSACAG00000010589
Anolis carolinensis
ENSACAG00000010589
N
0.778
ENSCAFG00000001569
Canis familiaris
ENSCAFG00000001569
N
0.778
ENSDNOG00000002674
Dasypus novemcinctus
ENSDNOG00000002674
N
0.778
BAE48358
Xenopus laevis
BAE48358
N
0.778
ENSLAFG00000009512
Loxodonta africana
ENSLAFG00000009512
N
0.778
AAI61707
Xenopus laevis
AAI61707
N
0.778
AAY89585
Xenopus laevis
AAY89585
N
0.778
recql4
Xenopus tropicalis
ENSXETG00000016582
N
0.778
ENSOPRG00000002588
Ochotona princeps
ENSOPRG00000002588
N
0.778
ENSOANG00000003526
Ornithorhynchus anatinus
ENSOANG00000003526
N
0.722
ENSECAG00000018665
Equus caballus
ENSECAG00000018665
N
0.722
ENSTSYG00000012090
Tarsius syrichta
ENSTSYG00000012090
N
0.722
ENSEEUG00000005223
Erinaceus europaeus
ENSEEUG00000005223
N
0.722